Miyakogusa Predicted Gene

Lj4g3v2800430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2800430.1 Non Chatacterized Hit- tr|G7LB95|G7LB95_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,61.73,3e-18,
,CUFF.51653.1
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39810.2                                                        65   1e-11
Glyma04g39810.1                                                        62   1e-10

>Glyma04g39810.2 
          Length = 72

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 1  MRLFIPALFLFLVFTFNVMIHVVQGGRSFINKEVVATGSSAPTRRGNCEKQKGGCKERSG 60
          MRL  P L LFLVF F  +      G++  N+ VV  GS +  R G CEKQ    +E +G
Sbjct: 1  MRLSKPTLLLFLVFIFTTV-----QGQAVTNERVV--GSESVRRSGGCEKQGFEYREGNG 53

Query: 61 GLEESVMFEHEDYVYTNSLP 80
          GLE++V+ E+EDY+YTNSLP
Sbjct: 54 GLEDTVL-ENEDYIYTNSLP 72


>Glyma04g39810.1 
          Length = 77

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 9/83 (10%)

Query: 1  MRLFIPALFLFLVFTFNVMIHVVQGGRSFINKEVVATGSSAP---TRRGNCEKQKGGCKE 57
          MRL  P L LFLVF F  +      G++  N+ VV + S       R G CEKQ    +E
Sbjct: 1  MRLSKPTLLLFLVFIFTTV-----QGQAVTNERVVGSESVVSFELRRSGGCEKQGFEYRE 55

Query: 58 RSGGLEESVMFEHEDYVYTNSLP 80
           +GGLE++V+ E+EDY+YTNSLP
Sbjct: 56 GNGGLEDTVL-ENEDYIYTNSLP 77