Miyakogusa Predicted Gene
- Lj4g3v2787010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2787010.1 tr|Q9LS83|Q9LS83_ARATH Similarity to Ac-like
transposase OS=Arabidopsis thaliana PE=4 SV=1,38.64,1e-18,Ribonuclease
H-like,Ribonuclease H-like domain; SUBFAMILY NOT NAMED,NULL; BED
FINGER-RELATED,NULL,CUFF.51640.1
(190 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g13970.1 106 2e-23
Glyma10g16030.1 102 3e-22
Glyma04g34950.1 100 1e-21
Glyma03g25710.1 94 1e-19
Glyma18g38460.1 85 5e-17
Glyma07g03280.1 76 2e-14
Glyma01g28840.1 72 4e-13
Glyma15g31510.1 70 9e-13
Glyma11g17510.1 68 5e-12
Glyma15g15880.1 65 3e-11
Glyma07g13770.1 65 3e-11
Glyma09g15130.2 65 4e-11
Glyma18g15670.1 59 2e-09
Glyma0022s00450.1 59 3e-09
Glyma08g10320.1 57 1e-08
Glyma01g26960.1 55 5e-08
>Glyma04g13970.1
Length = 432
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 37 NHNVGGVERKIDQKVVHEFIAQMVTEHDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDY 96
NH+ + +KIDQ VV+E I+ + EHDLP FVE F+ L +Y+ D SR
Sbjct: 47 NHDGRFINKKIDQSVVYEMISITIIEHDLPFSFVEHRRFKELLQYLHPDVK---VPSRRV 103
Query: 97 VAADVMRVYLLEKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKL 156
+V +Y EK+ +K L+ V R+ LT WTS G +LTAHYVD +W+LN+K+
Sbjct: 104 ATMNVNNLYDSEKKNMKCMLSKVPSRISLTSDVWTSCTFEGYISLTAHYVDANWELNSKM 163
Query: 157 LNFGHMAPPH 166
LNF H PPH
Sbjct: 164 LNFSHFPPPH 173
>Glyma10g16030.1
Length = 234
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 48 DQKVVHEFIAQMVTEHDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLL 107
DQ VV+E I+ M+ EH LP FVE F+ L +Y+ D SR +V +Y
Sbjct: 30 DQSVVYETISMMIIEHGLPFSFVEHRRFKELLQYLHHDVK---VPSRRVATMNVNNLYES 86
Query: 108 EKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
EK+K+K L+ V R+ LT WTS + G +LTA+YVD +WKLN+K+LNF H PPHS
Sbjct: 87 EKKKMKCMLSKVPSRISLTSDVWTSCTSEGYISLTAYYVDANWKLNSKMLNFSHFPPPHS 146
>Glyma04g34950.1
Length = 680
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 47 IDQKVVHEFIAQMVTEHDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYL 106
ID V I+ M+ EHDLP FVE F+ L +Y+ D SR +V +Y
Sbjct: 149 IDVDVHENMISMMIIEHDLPFSFVEHRRFKELLRYLHPDVK---VPSRCVATMNVNNLYE 205
Query: 107 LEKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPH 166
EK+K+K L+ V R+ LT WTS + G +LTAHYVD +WKLN+K+LNF H PPH
Sbjct: 206 SEKKKMKCMLSKVPSRISLTSDVWTSCTSEGYISLTAHYVDANWKLNSKMLNFSHFPPPH 265
Query: 167 S 167
S
Sbjct: 266 S 266
>Glyma03g25710.1
Length = 230
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 59 MVTEHDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELAS 118
M+ EHDLP FVE F+ L +Y+ D SR +V +Y EK+K+K L+
Sbjct: 1 MIIEHDLPFSFVEHRRFKELLQYLHPDVK---VPSRHVATMNVNNLYESEKKKMKCMLSK 57
Query: 119 VRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
V R+ LT WTS + G +LTAHYVD +WKLN+K+LNF H PP+S
Sbjct: 58 VPSRISLTSDVWTSCTSEGYISLTAHYVDANWKLNSKMLNFSHFPPPYS 106
>Glyma18g38460.1
Length = 267
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 63 HDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASVRGR 122
HDLP FVE F+ L +Y+ D SR +V +Y EK+K+K L+ V R
Sbjct: 1 HDLPFSFVEHRRFKELLQYLHPD---VKVPSRHVATMNVNNLYDFEKKKMKCMLSKVPSR 57
Query: 123 LCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
+ LT WTS + G +LT HYVD +WKLN+K+LNF H PHS
Sbjct: 58 ISLTSDVWTSCNSEGYISLTTHYVDANWKLNSKMLNFSHFPHPHS 102
>Glyma07g03280.1
Length = 661
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 7 NSESDSTSVGNNCQVLEPQMKRPRTLQGLKNHNVGGVERKIDQKVVHEFIAQMVTEHDLP 66
N + G + P K+PR G + + DQ+ + +A+M+ HD P
Sbjct: 87 NQQRSYPKTGGSLDTANPPKKQPRATPGFAGNGIS-----FDQERCNHDVAKMIILHDYP 141
Query: 67 CEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASVRGRLCLT 126
V+ GF + + NS V D + +YL +KQ L + + G++ LT
Sbjct: 142 LHIVKQQGFIDFVRILQPQFNPLCLNS---VEGDCVAIYLRKKQNLLNVINGIPGQVNLT 198
Query: 127 LRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHSD 168
L WTS A G + H++D DWKL+ +LN + P SD
Sbjct: 199 LDLWTSNQAMGYVFVRGHFIDSDWKLHRPILNVVTVPFPVSD 240
>Glyma01g28840.1
Length = 201
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 60 VTEHDLPCEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASV 119
+ LP FV++ + L YI+ D N+ + + +++V+ K+KLK +
Sbjct: 3 IVRRGLPFNFVKYKWVRELLSYINFDVKHVSMNT---LVSSLLKVHGEMKEKLKYAIHKC 59
Query: 120 RGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
R+CLT WT+ G LT H+VD +WKLN+K+L F + PPH+
Sbjct: 60 HNRICLTSNCWTACTQEGYICLTTHFVDNNWKLNSKILVFCKLEPPHT 107
>Glyma15g31510.1
Length = 226
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 108 EKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
+K LK ELAS+ R+ LT WTS G LTAHYVD W L +K++NF HM PPH+
Sbjct: 13 QKADLKEELASIPNRISLTCDLWTSCNTEGFICLTAHYVDSKWNLQSKIINFQHMPPPHT 72
Query: 168 DFLL 171
F L
Sbjct: 73 GFEL 76
>Glyma11g17510.1
Length = 348
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 78 LTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASVRGRLCLTLRHWTSEAAHG 137
L YI+SD SR+ + + +++++ K+KLK + R+CLT WT+ G
Sbjct: 2 LLSYINSDVKHV---SRNTLVSSLLKLHGEMKEKLKYSIHKCHNRICLTSDCWTTCTQEG 58
Query: 138 DFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
LTAH+VD +WKLN+K+L F + PPH+
Sbjct: 59 YICLTAHFVDNNWKLNSKILAFCKLEPPHT 88
>Glyma15g15880.1
Length = 358
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 110 QKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHSDF 169
+K+K L+ V R+ LT W S G +LTAHYV +WKLN+K+LNF H PPHS +
Sbjct: 24 KKMKCMLSKVPSRISLTSDVWISCIFEGYISLTAHYVGANWKLNSKMLNFSHFPPPHSGW 83
Query: 170 LLHPMMN 176
+ H + +
Sbjct: 84 IEHKIFS 90
>Glyma07g13770.1
Length = 272
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 112 LKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
+K L+ V R+ LT WTS + G +LTAHYVD +W LN+K+LNF H PPHS
Sbjct: 1 MKCMLSKVPSRISLTFDVWTSCTSEGYISLTAHYVDANWMLNSKMLNFSHFPPPHS 56
>Glyma09g15130.2
Length = 672
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 22 LEPQMKRPRTLQGLKNHNVGGVERKIDQKVVHEFIAQMVTEHDLPCEFVEWNGFQALTKY 81
EP+ K+ + N G K DQ+ +A+M+ H P VE GF+ K
Sbjct: 108 FEPEHKKDEII------NFGS--SKFDQERSQLDLARMIILHGYPLSLVEQVGFKVFVKN 159
Query: 82 ISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTL 141
+ Q V + +Y EK+K+ + + GR+ L++ W+S L
Sbjct: 160 L---QPLFEFTPNSSVEISCIDIYRREKEKVFDMINRLHGRINLSIETWSSTENSLYLCL 216
Query: 142 TAHYVDEDWKLNAKLLNFGHMAPPHSDFLL 171
+AHY+DE+W L KLLNF + H++ LL
Sbjct: 217 SAHYIDEEWTLQKKLLNFVTLDSSHTEDLL 246
>Glyma18g15670.1
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 67 CEFVEWNGFQALTKYISSDQAQCVSNSRDYVAADVMRVYLLEKQKLKRELASVRGRLCLT 126
C + W F + + A+C + + YV + + + A G++CLT
Sbjct: 37 CTSIAWKSFTKIGVVDGKEHAECNACGQQYVIGGSKVAKFHDVGGMIIDHA---GKICLT 93
Query: 127 LRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
WT+ G LT H+VD +WKLN+K+L F + PPH+
Sbjct: 94 SDCWTACTQEGYICLTTHFVDNNWKLNSKILAFCKLEPPHT 134
>Glyma0022s00450.1
Length = 235
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 130 WTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
WTS G +LTAHYVD +WKLN+K+LNF H PPHS
Sbjct: 8 WTSCTFEGYISLTAHYVDANWKLNSKMLNFSHFPPPHS 45
>Glyma08g10320.1
Length = 736
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 31 TLQGLKNHNVGGVERKIDQKVVHEFIAQMVTEHDLPCEFVEWNGFQALTKYISSDQAQCV 90
+LQ L N+ + Q+ + +A+M+ +LP +FVE GF +++++ Q Q
Sbjct: 119 SLQELGNNLTYDELVEFHQEFCTQALAKMIIIDELPFKFVENKGF---GEFVTAFQPQFK 175
Query: 91 SNSRDYVAADVMRVYLLEKQKLKRELASVRGRLCLTLRHWTSEAAHGDFTLTAHYVDEDW 150
S+ + D M ++ + K KLK L+ + + LT WTS +TAH +DE W
Sbjct: 176 IPSQITIVEDCMNLHRVAKAKLKFNLSQNKQMMSLTTDTWTSIHNKNYLCVTAHCIDERW 235
Query: 151 KLNAKLLNFGHMAPPH 166
+L +L+F + P H
Sbjct: 236 ELIKMILSFV-LIPDH 250
>Glyma01g26960.1
Length = 203
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 123 LCLTLRHWTSEAAHGDFTLTAHYVDEDWKLNAKLLNFGHMAPPHS 167
+ LT WTS G +LT HYVD +WKLN+ +LNF H PPHS
Sbjct: 1 ISLTSDVWTSCIFKGYISLTTHYVDANWKLNSIMLNFSHFPPPHS 45