Miyakogusa Predicted Gene

Lj4g3v2754390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2754390.1 Non Chatacterized Hit- tr|I1JY52|I1JY52_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32055
PE,63,3e-17,seg,NULL; PsaN,Photosystem I PsaN, reaction centre subunit
N,NODE_37384_length_615_cov_19.052032.path2.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39370.5                                                       209   1e-54
Glyma06g15540.1                                                       208   2e-54
Glyma04g39370.4                                                       148   2e-36
Glyma06g15540.2                                                       147   3e-36
Glyma04g39370.1                                                       147   6e-36
Glyma04g39370.3                                                        63   1e-10
Glyma04g39370.2                                                        63   1e-10

>Glyma04g39370.5 
          Length = 167

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/171 (64%), Positives = 121/171 (70%), Gaps = 16/171 (9%)

Query: 1   MAAMNSSVLACSYA----GCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA--------S 48
           MAAMNSSVLACSYA     CS+LN K+TS+  VA     S +KLP+IKA+A         
Sbjct: 1   MAAMNSSVLACSYAISGAACSELNGKVTSVAYVA----CSGYKLPLIKAEARVPKAKESE 56

Query: 49  DGRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANKELNDKKRLATSGANFARAYT 108
            GRR                        IE YLE+SKANKELNDKKRLAT+GANFARAYT
Sbjct: 57  GGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYT 116

Query: 109 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYNCGSNVFWKW 159
           V+FG+CKFPENFTGCQDLAKQKKVPF+SDDLELECEGKDKY CGSNVFWKW
Sbjct: 117 VEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 167


>Glyma06g15540.1 
          Length = 166

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/170 (64%), Positives = 122/170 (71%), Gaps = 15/170 (8%)

Query: 1   MAAMNSSVLACSYA----GCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA-------SD 49
           MA MNSSVLACSYA     CS+LN K+TS+ SVA     S +KLP+IK +A       S+
Sbjct: 1   MAGMNSSVLACSYAISGAACSELNGKVTSVASVA----SSGYKLPLIKCEARVPKAKESE 56

Query: 50  GRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANKELNDKKRLATSGANFARAYTV 109
           GRR                        I+ YLE+SKANKELNDKKRLAT+GANFARAYTV
Sbjct: 57  GRRGALVLLAATLFISAASNSSANAGIIDDYLERSKANKELNDKKRLATTGANFARAYTV 116

Query: 110 QFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYNCGSNVFWKW 159
           +FG+CKFPENFTGCQDLAKQKKVPF+SDDLELECEGKDKY CGSNVFWKW
Sbjct: 117 EFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 166


>Glyma04g39370.4 
          Length = 139

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 93/142 (65%), Gaps = 16/142 (11%)

Query: 1   MAAMNSSVLACSYA----GCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA--------S 48
           MAAMNSSVLACSYA     CS+LN K+TS+  VA     S +KLP+IKA+A         
Sbjct: 1   MAAMNSSVLACSYAISGAACSELNGKVTSVAYVA----CSGYKLPLIKAEARVPKAKESE 56

Query: 49  DGRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANKELNDKKRLATSGANFARAYT 108
            GRR                        IE YLE+SKANKELNDKKRLAT+GANFARAYT
Sbjct: 57  GGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYT 116

Query: 109 VQFGTCKFPENFTGCQDLAKQK 130
           V+FG+CKFPENFTGCQDLAKQK
Sbjct: 117 VEFGSCKFPENFTGCQDLAKQK 138


>Glyma06g15540.2 
          Length = 138

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/141 (58%), Positives = 94/141 (66%), Gaps = 15/141 (10%)

Query: 1   MAAMNSSVLACSYA----GCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA-------SD 49
           MA MNSSVLACSYA     CS+LN K+TS+ SVA     S +KLP+IK +A       S+
Sbjct: 1   MAGMNSSVLACSYAISGAACSELNGKVTSVASVA----SSGYKLPLIKCEARVPKAKESE 56

Query: 50  GRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANKELNDKKRLATSGANFARAYTV 109
           GRR                        I+ YLE+SKANKELNDKKRLAT+GANFARAYTV
Sbjct: 57  GRRGALVLLAATLFISAASNSSANAGIIDDYLERSKANKELNDKKRLATTGANFARAYTV 116

Query: 110 QFGTCKFPENFTGCQDLAKQK 130
           +FG+CKFPENFTGCQDLAKQK
Sbjct: 117 EFGSCKFPENFTGCQDLAKQK 137


>Glyma04g39370.1 
          Length = 184

 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 93/142 (65%), Gaps = 16/142 (11%)

Query: 1   MAAMNSSVLACSYA----GCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA--------S 48
           MAAMNSSVLACSYA     CS+LN K+TS+  VA     S +KLP+IKA+A         
Sbjct: 1   MAAMNSSVLACSYAISGAACSELNGKVTSVAYVA----CSGYKLPLIKAEARVPKAKESE 56

Query: 49  DGRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANKELNDKKRLATSGANFARAYT 108
            GRR                        IE YLE+SKANKELNDKKRLAT+GANFARAYT
Sbjct: 57  GGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYT 116

Query: 109 VQFGTCKFPENFTGCQDLAKQK 130
           V+FG+CKFPENFTGCQDLAKQK
Sbjct: 117 VEFGSCKFPENFTGCQDLAKQK 138


>Glyma04g39370.3 
          Length = 105

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 51/100 (51%), Gaps = 16/100 (16%)

Query: 1  MAAMNSSVLACSY----AGCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA--------S 48
          MAAMNSSVLACSY    A CS+LN K+TS+  VA     S +KLP+IKA+A         
Sbjct: 1  MAAMNSSVLACSYAISGAACSELNGKVTSVAYVA----CSGYKLPLIKAEARVPKAKESE 56

Query: 49 DGRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANK 88
           GRR                        IE YLE+SKANK
Sbjct: 57 GGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANK 96


>Glyma04g39370.2 
          Length = 105

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 51/100 (51%), Gaps = 16/100 (16%)

Query: 1  MAAMNSSVLACSY----AGCSDLNAKLTSMPSVALPPNVSSHKLPVIKAQA--------S 48
          MAAMNSSVLACSY    A CS+LN K+TS+  VA     S +KLP+IKA+A         
Sbjct: 1  MAAMNSSVLACSYAISGAACSELNGKVTSVAYVA----CSGYKLPLIKAEARVPKAKESE 56

Query: 49 DGRRXXXXXXXXXXXXXXXXXXXXXXXXIEQYLEKSKANK 88
           GRR                        IE YLE+SKANK
Sbjct: 57 GGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANK 96