Miyakogusa Predicted Gene

Lj4g3v2743010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2743010.1 Non Chatacterized Hit- tr|I3STW8|I3STW8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,51.64,0.000000000000003,
,NODE_77732_length_518_cov_40.003860.path2.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g15720.1                                                        65   2e-11

>Glyma06g15720.1 
          Length = 828

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 19/115 (16%)

Query: 1   MNKSGRKLSSKWDLIDERESEFAPDGVANSNSTSSRWSYKERNDRLNPRMEFLSKEPLSG 60
           M+ SG+K SSKWDL D    +F+PD   +     S WS     D+L         +  SG
Sbjct: 1   MSGSGKKRSSKWDLRDN--PDFSPD---DGKQLRSGWS--SAGDKL---------KHFSG 44

Query: 61  GTHSNKYDGTNNEEYRVLDATIARDTDGSYGMEMSPGFEDWKNK--HSQSPKNSY 113
           G  SNK D   N++YRVLD+T+  D D SY  +MSPG + WK+K  +SQSPKN +
Sbjct: 45  GRGSNK-DNIMNKDYRVLDSTMEWDEDESYDHKMSPGLDAWKHKRHNSQSPKNGW 98