Miyakogusa Predicted Gene
- Lj4g3v2742990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2742990.1 Non Chatacterized Hit- tr|J3LLE2|J3LLE2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G1,35.46,4e-18,seg,NULL; zf-CCCH,Zinc finger, CCCH-type; no
description,NULL; zinc finger,Zinc finger, CCCH-type;
Z,NODE_12332_length_2268_cov_48.412697.path2.1
(663 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g15720.1 689 0.0
Glyma04g39220.1 378 e-105
Glyma04g39220.2 262 7e-70
Glyma05g32400.1 94 5e-19
Glyma06g22290.1 77 5e-14
Glyma04g32250.1 77 5e-14
Glyma15g08320.1 57 8e-08
Glyma13g31050.2 57 8e-08
Glyma13g31050.1 57 8e-08
>Glyma06g15720.1
Length = 828
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/707 (55%), Positives = 469/707 (66%), Gaps = 49/707 (6%)
Query: 1 MRPEGLAQPCRDFAAGKCIRGSQCHFLHHDNQNYENGRESRQRQDRAPGYSAPHESGDIS 60
MR G QPCRDFAAGKC RGS CHFLH DNQN+E+G E + R+D AP YSAP E D S
Sbjct: 127 MRAGGSTQPCRDFAAGKCRRGSHCHFLH-DNQNHEDGWEDKYREDGAPRYSAPREGRDYS 185
Query: 61 LTSGRSDEACINFAKGRCRFGASCRHVHHGNSDEFGKVSVGESSRENDIDNRRLENSFKQ 120
L SGRSDEACINF KGRCR GASC+ VHH NSD KVSV +RE +ID R ++SF+Q
Sbjct: 186 LKSGRSDEACINFPKGRCRMGASCKFVHHNNSDGHSKVSVDGLTREREIDRRHRDSSFEQ 245
Query: 121 GGRHDLNRSADTPCRFFAFGNCRNGNHCRFSHDRQXXXXXXXXXXXXXXXXNQGGD-QVS 179
G H NR DT C+FFA +CRNG +CRFSHDRQ N GGD +
Sbjct: 246 GSGHGPNR-GDTLCKFFANESCRNGKYCRFSHDRQACRSHNRRLRDDRWASNPGGDYHML 304
Query: 180 NRPKLSDSASSNGRLRDDRWRSDGSIADVSKVWDGPKSNDLSAVSNSRKLVEDNQDGIMG 239
+RPKLSDS S N R R DRW SDG+ AD KVWD P+ ND AVS++ KLVED + ++
Sbjct: 305 DRPKLSDSVSPNRRPRGDRWGSDGNKADADKVWDSPERNDTVAVSDTAKLVEDKSENVVA 364
Query: 240 APGHGFSAWPMSDGWDHSLDKNMVHDKTSFSSDKKEPNLWAAGNATANIHTSQPVGTGIW 299
A GF+ M DGW HSLDK+ VH K FSSDKKE + W AGNA AN+H SQ VGT IW
Sbjct: 365 AE-QGFTPLAMRDGWGHSLDKSRVHSKQPFSSDKKEADSWIAGNA-ANMHGSQSVGTDIW 422
Query: 300 PGDE-QMSPDWN--VGTSSHFKKNHEQNN-----------------LQVAPGHGYNQNAQ 339
GD+ +MSPDW+ V +SS ++ HEQN +Q+APG +NQNA+
Sbjct: 423 LGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFMYLATSEHDRIQIAPGQDFNQNAE 482
Query: 340 NVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQELFTEKKYIGEPNIMDASLLQVGS 399
+ N LHSSS VGQ+Q ++P + IV+GM QE+ TEKKY EPNIMDA LLQV S
Sbjct: 483 SFNPLHSSSCQVVGQTQVAAPILPSQGGIVDGMLKQEVSTEKKYTTEPNIMDAGLLQVSS 542
Query: 400 RNPS-TQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSNLNSHDAKDTPS-------G 451
R+P T+N+V KEQL QLT L+ASLA ILGTG QLPQL + LNSHDAK T S
Sbjct: 543 RDPPPTENVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAKGTSSLAKAEVLA 602
Query: 452 KPVSIAFSKPDPSIGFQKHNNP-------------SGFSPMISPSKIIPKESVEMPSLLS 498
P+S +PDP++G K +P SG +P I P K + ++ VE+ S +
Sbjct: 603 MPLSNTLIRPDPAVGLLKQYDPMCDSVEPKSAVASSGVTPAIPPCKKVAEDVVEISSQSN 662
Query: 499 NSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDNKESN-EMVAEEKRSSRGENKITK 556
+ Q +S K+A SEE LVKS LI LQ +NIG NK+ N E++ EE++ S+ + K TK
Sbjct: 663 TARQNCGNSSKSAGSEE-LVKSDPLILLQPGQNIGVNKDDNKEVLPEERQKSKDDPKNTK 721
Query: 557 ESGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXX 616
ESGPLE+M+Q+ GPDE KKTK +KG RAFK +LVEF+KELLKPTWK+GQITKDDYK I
Sbjct: 722 ESGPLENMEQTDGPDEAKKTKGMKGSRAFKFALVEFVKELLKPTWKDGQITKDDYKTIVK 781
Query: 617 XXXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 663
Q A++PQTQEKID YLS SKPKLNKL+QAYVEKVQKA
Sbjct: 782 KVVDKVTGSMQGANIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 828
>Glyma04g39220.1
Length = 416
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/418 (53%), Positives = 271/418 (64%), Gaps = 44/418 (10%)
Query: 288 IHTSQPVGTGIWPGDE-QMSPDWN--VGTSSHFKKNHEQNN-----------------LQ 327
+H SQ +GT IW GD+ +MSPDW+ V +SS ++ HEQN +Q
Sbjct: 1 MHGSQSIGTDIWLGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFMYLDTSEHDRIQ 60
Query: 328 VAPGHGYNQNAQNVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQELFTEKKYIGEP 387
+APG G+NQNA + N+LHSSS AVGQSQ ++P + IV+GM QE+ TEKKY EP
Sbjct: 61 IAPGQGFNQNAVSFNSLHSSSCQAVGQSQVAVPILPSKGGIVDGMLKQEVSTEKKYTAEP 120
Query: 388 NIMDASLLQVGSRNPS-TQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSNLNSHDAK 446
NIMDA L QV SRNP T N+V KEQL QLT L+ASLA ILGTG QLPQL + LNSHDAK
Sbjct: 121 NIMDAGLSQVSSRNPPPTANVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAK 180
Query: 447 DTPS-------GKPVSIAFSKPDPSIGFQKHNNP------------SGFSPMISPSKIIP 487
D S PVS F +PDP++G K +P SG P I PS+ +
Sbjct: 181 DISSLAKTEVPAMPVSNTFIRPDPTVGLLKQYDPMCDSVEPKGAVASGVPPAIPPSQKV- 239
Query: 488 KESVEMPSLLSNSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDNKESN-EMVAEEK 545
+ VE+PS + Q DS K A SEE LVKS LIQLQ +N G NK++N EM+ EE
Sbjct: 240 ADVVEIPSQSNTGRQNCGDSSKAAGSEE-LVKSDPLIQLQPGQNTGVNKDNNKEMLPEET 298
Query: 546 RSSRGENKITKESGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQ 605
S+ + K TKESGP E+M+Q+ GPDE KK K +KG RAFK +LVEF+KELLKPTWK+GQ
Sbjct: 299 LKSKDDPKSTKESGPFENMEQTDGPDEAKKIKGMKGNRAFKFALVEFVKELLKPTWKDGQ 358
Query: 606 ITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 663
ITK+DYK I Q ++PQTQEKID YLS SKPKLNKL+QAYVEKVQKA
Sbjct: 359 ITKEDYKTIVKKVVDKVTGSMQGVNIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 416
>Glyma04g39220.2
Length = 341
Score = 262 bits (670), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/332 (50%), Positives = 205/332 (61%), Gaps = 44/332 (13%)
Query: 288 IHTSQPVGTGIWPGDE-QMSPDWN--VGTSSHFKKNHEQNN-----------------LQ 327
+H SQ +GT IW GD+ +MSPDW+ V +SS ++ HEQN +Q
Sbjct: 1 MHGSQSIGTDIWLGDDAKMSPDWDYRVRSSSCIEEKHEQNKHGITQGFMYLDTSEHDRIQ 60
Query: 328 VAPGHGYNQNAQNVNALHSSSSHAVGQSQPPFSVVPPRARIVEGMQNQELFTEKKYIGEP 387
+APG G+NQNA + N+LHSSS AVGQSQ ++P + IV+GM QE+ TEKKY EP
Sbjct: 61 IAPGQGFNQNAVSFNSLHSSSCQAVGQSQVAVPILPSKGGIVDGMLKQEVSTEKKYTAEP 120
Query: 388 NIMDASLLQVGSRN-PSTQNMVSKEQLVQLTCLTASLAQILGTGSQLPQLCSNLNSHDAK 446
NIMDA L QV SRN P T N+V KEQL QLT L+ASLA ILGTG QLPQL + LNSHDAK
Sbjct: 121 NIMDAGLSQVSSRNPPPTANVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAK 180
Query: 447 DTPS-------GKPVSIAFSKPDPSIGFQKHNNP------------SGFSPMISPSKIIP 487
D S PVS F +PDP++G K +P SG P I PS+ +
Sbjct: 181 DISSLAKTEVPAMPVSNTFIRPDPTVGLLKQYDPMCDSVEPKGAVASGVPPAIPPSQKV- 239
Query: 488 KESVEMPSLLSNSEQ-FDDSCKTAFSEEQLVKSKHLIQLQKDENIGDNKESN-EMVAEEK 545
+ VE+PS + Q DS K A SEE LVKS LIQLQ +N G NK++N EM+ EE
Sbjct: 240 ADVVEIPSQSNTGRQNCGDSSKAAGSEE-LVKSDPLIQLQPGQNTGVNKDNNKEMLPEET 298
Query: 546 RSSRGENKITKESGPLESMDQSGGPDEIKKTK 577
S+ + K TKESGP E+M+Q+ GPDE KK K
Sbjct: 299 LKSKDDPKSTKESGPFENMEQTDGPDEAKKIK 330
>Glyma05g32400.1
Length = 74
Score = 94.0 bits (232), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 53/74 (71%)
Query: 581 GMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDR 640
G+ FK SLVEF+KELL PTWK+G+ITK+DYK I Q AH+PQTQEKID
Sbjct: 1 GIHTFKFSLVEFVKELLNPTWKDGKITKEDYKAIVKKVTDKVIDTVQGAHIPQTQEKIDC 60
Query: 641 YLSVSKPKLNKLIQ 654
YLS SK KLNKL+Q
Sbjct: 61 YLSSSKSKLNKLVQ 74
>Glyma06g22290.1
Length = 512
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 526 QKDENIGDNKESNEMVAEEKRSSRGENKITKESGPLESMDQSGGPDEIKKTKDVKGMRAF 585
Q ++ G+ ++ E+ A E S + + K + ++Q P + KK+KD + M+ F
Sbjct: 376 QNNDEYGETADA-EVGAVENESLSDDVDVAKMTSGEVEINQVKSPGKRKKSKDSRSMKLF 434
Query: 586 KGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQEKIDRYLSVS 645
K S+ F+KE+LKP+W++G ++K +K I + VP++Q KI +Y+ S
Sbjct: 435 KVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQVKISQYIDSS 494
Query: 646 KPKLNKLIQAYVEKVQKA 663
+ KL KL+ YV+K K
Sbjct: 495 QRKLTKLVMGYVDKYVKV 512
>Glyma04g32250.1
Length = 744
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 558 SGPLESMDQSGGPDEIKKTKDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXX 617
SG +E ++Q P + KK+KD + M+ FK S+ F+KE+LKP+W++G ++K +K I
Sbjct: 640 SGEVE-INQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKK 698
Query: 618 XXXXXXXXXQRAHVPQTQEKIDRYLSVSKPKLNKLIQAYVEKVQKA 663
+ VP++Q KI +Y+ S+ KL KL+ YV+K K
Sbjct: 699 TVDKVSGAMKGHRVPKSQTKISQYIDSSQRKLTKLVMGYVDKYVKV 744
>Glyma15g08320.1
Length = 464
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 577 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 636
K+ K ++ F+ +LV+ +KELLKP W EG ++KD + I + +P +
Sbjct: 379 KESKALKFFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKKSVDKVVSTLEPHQIP-IMD 437
Query: 637 KIDRYLSVSKPKLNKLIQAYVEKVQK 662
+Y+S S+ K+ KL+ YV K K
Sbjct: 438 TAKQYVSSSQVKIAKLVNGYVNKYGK 463
>Glyma13g31050.2
Length = 431
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 577 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 636
K+ K ++ F+ L++ +KELLKP W EG+++KD + I + +P T +
Sbjct: 346 KESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP-TID 404
Query: 637 KIDRYLSVSKPKLNKLIQAYVEKVQKA 663
+Y+S S+ K+ KL+ YV K K+
Sbjct: 405 TAKQYVSSSQVKIAKLVNGYVNKYGKS 431
>Glyma13g31050.1
Length = 431
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 577 KDVKGMRAFKGSLVEFIKELLKPTWKEGQITKDDYKEIXXXXXXXXXXXXQRAHVPQTQE 636
K+ K ++ F+ L++ +KELLKP W EG+++KD + I + +P T +
Sbjct: 346 KESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIP-TID 404
Query: 637 KIDRYLSVSKPKLNKLIQAYVEKVQKA 663
+Y+S S+ K+ KL+ YV K K+
Sbjct: 405 TAKQYVSSSQVKIAKLVNGYVNKYGKS 431