Miyakogusa Predicted Gene

Lj4g3v2731570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2731570.1 Non Chatacterized Hit- tr|I1N9I5|I1N9I5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18985
PE,85.53,0,POTASSIUM CHANNEL REGULATORY FACTOR,NULL; PRE-MRNA SPLICING
FACTOR-RELATED,NULL; Functional domain o,CUFF.51582.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33970.1                                                       276   5e-75
Glyma03g31130.1                                                       275   1e-74

>Glyma19g33970.1 
          Length = 411

 Score =  276 bits (707), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 130/152 (85%), Positives = 140/152 (92%), Gaps = 1/152 (0%)

Query: 1   MPEAKRRTADGKSLVARFKQCARYLNPLFKFCRNKILPDDIRQALLLMVECFMKRDYQAA 60
           MPEA++RTA GKS+VA FKQCARYLNPLFKFCR K+LPDDIRQALLLMVEC MKRDY AA
Sbjct: 240 MPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAA 299

Query: 61  MSHYMKLAVGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMSIC 120
           M HY+KLA+GNAPWPIGVTMVGIHERSAREKI+TNSVAHIMNDETTRKYLQSVKRLM+ C
Sbjct: 300 MDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFC 359

Query: 121 QLLYPTLPSKAFEFNSLANGGSDLKSLLAEDK 152
           Q  YPTLPSKA EFNSLAN GSDL SLLAE++
Sbjct: 360 QRRYPTLPSKAVEFNSLAN-GSDLHSLLAEER 390


>Glyma03g31130.1 
          Length = 413

 Score =  275 bits (704), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/152 (84%), Positives = 140/152 (92%), Gaps = 1/152 (0%)

Query: 1   MPEAKRRTADGKSLVARFKQCARYLNPLFKFCRNKILPDDIRQALLLMVECFMKRDYQAA 60
           MPEA++RTA GKS+VA FKQCARYLNPLFKFCR K+LPDDIRQALLLMVEC M+RDY AA
Sbjct: 241 MPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMRRDYLAA 300

Query: 61  MSHYMKLAVGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMSIC 120
           M HY+KLA+GNAPWPIGVTMVGIHERSAREKI+TNSVAHIMNDETTRKYLQSVKRLM+ C
Sbjct: 301 MDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFC 360

Query: 121 QLLYPTLPSKAFEFNSLANGGSDLKSLLAEDK 152
           Q  YPTLPSKA EFNSLAN GSDL SLLAE++
Sbjct: 361 QRRYPTLPSKAVEFNSLAN-GSDLHSLLAEER 391