Miyakogusa Predicted Gene
- Lj4g3v2730400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2730400.1 Non Chatacterized Hit- tr|I3T4D1|I3T4D1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.08,2e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.51613.1
(68 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g30830.1 79 1e-15
Glyma08g14040.1 75 2e-14
Glyma11g37770.1 57 5e-09
Glyma18g01710.1 51 2e-07
Glyma19g08270.1 47 4e-06
>Glyma05g30830.1
Length = 397
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/67 (59%), Positives = 47/67 (70%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
MGIG+RSSTNRKPSDSMRL SFPALTTKLNLPSSL P++D+SYI+
Sbjct: 1 MGIGSRSSTNRKPSDSMRLIMTTFVGIVFGFFIGVSFPALTTKLNLPSSLLPAIDISYIQ 60
Query: 61 DKDDSGH 67
+K G+
Sbjct: 61 EKYAGGN 67
>Glyma08g14040.1
Length = 397
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
MGI +RSS+NRKPSDSMRL SFPALTTKLNLPSSL P++D+SYI+
Sbjct: 1 MGISSRSSSNRKPSDSMRLIVTTFVGIVFGFFIGVSFPALTTKLNLPSSLLPAIDISYIQ 60
Query: 61 DKDDSGH 67
+K G+
Sbjct: 61 EKYAGGN 67
>Glyma11g37770.1
Length = 399
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MGI TRSS RKPS+ MR S P L+ TKLNLPS L PS+D+SYI
Sbjct: 1 MGIITRSSAGRKPSEIMRFFVTTFISIVLGFFIGVSVPTLSITKLNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
ED+
Sbjct: 61 EDR 63
>Glyma18g01710.1
Length = 399
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
M I TRSS RKPS+ M+ S P L+ TKLNLPS L PS+D+SYI
Sbjct: 1 MVIITRSSAGRKPSEIMKFFLTTFIGIVFGFFIGVSIPTLSITKLNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
ED+
Sbjct: 61 EDR 63
>Glyma19g08270.1
Length = 403
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MGI RS ++ +++MRL SFP L T++NLPSSL PS+D++Y+
Sbjct: 1 MGIPIRSGNIKRQNEAMRLTLATFVGVVFGFSLGVSFPTLALTRMNLPSSLLPSIDLTYV 60
Query: 60 ED 61
+D
Sbjct: 61 DD 62