Miyakogusa Predicted Gene

Lj4g3v2730400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2730400.1 Non Chatacterized Hit- tr|I3T4D1|I3T4D1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.08,2e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.51613.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g30830.1                                                        79   1e-15
Glyma08g14040.1                                                        75   2e-14
Glyma11g37770.1                                                        57   5e-09
Glyma18g01710.1                                                        51   2e-07
Glyma19g08270.1                                                        47   4e-06

>Glyma05g30830.1 
          Length = 397

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/67 (59%), Positives = 47/67 (70%)

Query: 1  MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
          MGIG+RSSTNRKPSDSMRL                SFPALTTKLNLPSSL P++D+SYI+
Sbjct: 1  MGIGSRSSTNRKPSDSMRLIMTTFVGIVFGFFIGVSFPALTTKLNLPSSLLPAIDISYIQ 60

Query: 61 DKDDSGH 67
          +K   G+
Sbjct: 61 EKYAGGN 67


>Glyma08g14040.1 
          Length = 397

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/67 (56%), Positives = 46/67 (68%)

Query: 1  MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
          MGI +RSS+NRKPSDSMRL                SFPALTTKLNLPSSL P++D+SYI+
Sbjct: 1  MGISSRSSSNRKPSDSMRLIVTTFVGIVFGFFIGVSFPALTTKLNLPSSLLPAIDISYIQ 60

Query: 61 DKDDSGH 67
          +K   G+
Sbjct: 61 EKYAGGN 67


>Glyma11g37770.1 
          Length = 399

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 1  MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
          MGI TRSS  RKPS+ MR                 S P L+ TKLNLPS L PS+D+SYI
Sbjct: 1  MGIITRSSAGRKPSEIMRFFVTTFISIVLGFFIGVSVPTLSITKLNLPSGLLPSIDLSYI 60

Query: 60 EDK 62
          ED+
Sbjct: 61 EDR 63


>Glyma18g01710.1 
          Length = 399

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 1  MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
          M I TRSS  RKPS+ M+                 S P L+ TKLNLPS L PS+D+SYI
Sbjct: 1  MVIITRSSAGRKPSEIMKFFLTTFIGIVFGFFIGVSIPTLSITKLNLPSGLLPSIDLSYI 60

Query: 60 EDK 62
          ED+
Sbjct: 61 EDR 63


>Glyma19g08270.1 
          Length = 403

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 1  MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
          MGI  RS   ++ +++MRL                SFP L  T++NLPSSL PS+D++Y+
Sbjct: 1  MGIPIRSGNIKRQNEAMRLTLATFVGVVFGFSLGVSFPTLALTRMNLPSSLLPSIDLTYV 60

Query: 60 ED 61
          +D
Sbjct: 61 DD 62