Miyakogusa Predicted Gene
- Lj4g3v2730340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2730340.1 Non Chatacterized Hit- tr|D8SEY2|D8SEY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.67,0.00000000000004,seg,NULL; eIF-4B,Plant specific
eukaryotic initiation factor 4B; SUBFAMILY NOT NAMED,NULL; FAMILY
NO,NODE_16003_length_761_cov_234.578186.path2.1
(265 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g30790.2 305 3e-83
Glyma05g30790.1 305 4e-83
Glyma08g13980.2 304 5e-83
Glyma08g13980.1 304 5e-83
Glyma12g03400.1 55 9e-08
Glyma11g11240.1 54 2e-07
>Glyma05g30790.2
Length = 524
Score = 305 bits (781), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/267 (60%), Positives = 181/267 (67%), Gaps = 7/267 (2%)
Query: 6 ERPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIEAKKAX 65
ERPRLVLDP +GDG VNE+P +NK +PFGAARPRE+VLA+KGLDWKK+DSEIE KK
Sbjct: 251 ERPRLVLDPPRGDGVVNESPVKASNKANPFGAARPREQVLAEKGLDWKKMDSEIETKKTS 310
Query: 66 XXXXXXXXXXXXXXXX-------EGPDAVLKPRPKVNPFGEAKPREVLLAERGADWRKID 118
+G DAV+K RPKVNPFG+AKPRE +L ERG DWRKID
Sbjct: 311 RPPSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKID 370
Query: 119 LELERRGVDRPXXXXXXXXXXXXXXXXXXXXXXPKMNSNQESADEAGANQTGAHAXXXXX 178
LELE R VDRP +NSN+ES DEAG +QT HA
Sbjct: 371 LELEHRSVDRPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSTHAILQQK 430
Query: 179 XXXXXXXIHDLDDKVRFGQKAVDRPGSSAGRTPVLSDRPPSRSGSFEDSRSVDFSDRPRS 238
I DLDDKVRFGQKA++RPGSSAG++ SDRP SRSGSFEDSRSVDF+DRPRS
Sbjct: 431 EKELELLIRDLDDKVRFGQKAIERPGSSAGKSSTFSDRPHSRSGSFEDSRSVDFTDRPRS 490
Query: 239 RGTGDAWMRPSDDRRQFQGSRERGFFS 265
RGTGD WM PSDDRRQFQGSRERG+FS
Sbjct: 491 RGTGDMWMHPSDDRRQFQGSRERGWFS 517
>Glyma05g30790.1
Length = 531
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/267 (60%), Positives = 181/267 (67%), Gaps = 7/267 (2%)
Query: 6 ERPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIEAKKAX 65
ERPRLVLDP +GDG VNE+P +NK +PFGAARPRE+VLA+KGLDWKK+DSEIE KK
Sbjct: 251 ERPRLVLDPPRGDGVVNESPVKASNKANPFGAARPREQVLAEKGLDWKKMDSEIETKKTS 310
Query: 66 XXXXXXXXXXXXXXXX-------EGPDAVLKPRPKVNPFGEAKPREVLLAERGADWRKID 118
+G DAV+K RPKVNPFG+AKPRE +L ERG DWRKID
Sbjct: 311 RPPSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMDWRKID 370
Query: 119 LELERRGVDRPXXXXXXXXXXXXXXXXXXXXXXPKMNSNQESADEAGANQTGAHAXXXXX 178
LELE R VDRP +NSN+ES DEAG +QT HA
Sbjct: 371 LELEHRSVDRPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSTHAILQQK 430
Query: 179 XXXXXXXIHDLDDKVRFGQKAVDRPGSSAGRTPVLSDRPPSRSGSFEDSRSVDFSDRPRS 238
I DLDDKVRFGQKA++RPGSSAG++ SDRP SRSGSFEDSRSVDF+DRPRS
Sbjct: 431 EKELELLIRDLDDKVRFGQKAIERPGSSAGKSSTFSDRPHSRSGSFEDSRSVDFTDRPRS 490
Query: 239 RGTGDAWMRPSDDRRQFQGSRERGFFS 265
RGTGD WM PSDDRRQFQGSRERG+FS
Sbjct: 491 RGTGDMWMHPSDDRRQFQGSRERGWFS 517
>Glyma08g13980.2
Length = 544
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/273 (61%), Positives = 185/273 (67%), Gaps = 8/273 (2%)
Query: 1 MEPDRERPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIE 60
+E ERPRLVLDP +GDG VNE+P +K +PFGAARPREEVLA+KGLDWKKLDSEIE
Sbjct: 266 VEQRTERPRLVLDPPRGDGLVNESPVKAMDKANPFGAARPREEVLAEKGLDWKKLDSEIE 325
Query: 61 AKKAX--XXXXXXXXXXXXXXXXEGP-----DAVLKPRPKVNPFGEAKPREVLLAERGAD 113
KK EGP DAV+K RPKVNPFG+AKPRE +L ERG D
Sbjct: 326 TKKTSRPTSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMD 385
Query: 114 WRKIDLELERRGVDRPXXXXXXXXXXXXXXXXXXXXXXPKMNSNQESADEAGANQTGAHA 173
WRKIDLELERR V RP +NSN+ES DEAG +QT HA
Sbjct: 386 WRKIDLELERRSVARPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSRHA 445
Query: 174 XXXXXXXXXXXXIHDLDDKVRFGQKAVDRPGSSAGRTPVLSDRPPSRSGSFEDSRSVDFS 233
IHDLD KVRFGQKAV+RPGSSAG++ SDRPPSRSGSFEDSRSVDF+
Sbjct: 446 ILQQKEKELELLIHDLDGKVRFGQKAVERPGSSAGKSSTFSDRPPSRSGSFEDSRSVDFT 505
Query: 234 DRPRSRGTGDAWMRPSDDRRQFQ-GSRERGFFS 265
DRPRSRGTGD WMRPSDDRRQFQ GSRERG+FS
Sbjct: 506 DRPRSRGTGDMWMRPSDDRRQFQGGSRERGWFS 538
>Glyma08g13980.1
Length = 551
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/273 (61%), Positives = 185/273 (67%), Gaps = 8/273 (2%)
Query: 1 MEPDRERPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIE 60
+E ERPRLVLDP +GDG VNE+P +K +PFGAARPREEVLA+KGLDWKKLDSEIE
Sbjct: 266 VEQRTERPRLVLDPPRGDGLVNESPVKAMDKANPFGAARPREEVLAEKGLDWKKLDSEIE 325
Query: 61 AKKAX--XXXXXXXXXXXXXXXXEGP-----DAVLKPRPKVNPFGEAKPREVLLAERGAD 113
KK EGP DAV+K RPKVNPFG+AKPRE +L ERG D
Sbjct: 326 TKKTSRPTSSHSSRPSSAQSNRSEGPGLQGTDAVVKSRPKVNPFGDAKPREAVLGERGMD 385
Query: 114 WRKIDLELERRGVDRPXXXXXXXXXXXXXXXXXXXXXXPKMNSNQESADEAGANQTGAHA 173
WRKIDLELERR V RP +NSN+ES DEAG +QT HA
Sbjct: 386 WRKIDLELERRSVARPETMEEKLLKEEIDNLKKELEKESTINSNKESVDEAGGDQTSRHA 445
Query: 174 XXXXXXXXXXXXIHDLDDKVRFGQKAVDRPGSSAGRTPVLSDRPPSRSGSFEDSRSVDFS 233
IHDLD KVRFGQKAV+RPGSSAG++ SDRPPSRSGSFEDSRSVDF+
Sbjct: 446 ILQQKEKELELLIHDLDGKVRFGQKAVERPGSSAGKSSTFSDRPPSRSGSFEDSRSVDFT 505
Query: 234 DRPRSRGTGDAWMRPSDDRRQFQ-GSRERGFFS 265
DRPRSRGTGD WMRPSDDRRQFQ GSRERG+FS
Sbjct: 506 DRPRSRGTGDMWMRPSDDRRQFQGGSRERGWFS 538
>Glyma12g03400.1
Length = 380
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 7 RPRLVLDPRK---GDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIEAKK 63
RP+LVL PR D V+ +PFG ARPRE+VLA+KG DWKK+D ++E+ K
Sbjct: 251 RPKLVLQPRTVSVSDEGVDGNNAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVK 310
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 82 EGPDAVLKPRPK-VNPFGEAKPREVLLAERGADWRKIDLELE 122
EG D +PK VNPFGEA+PRE +LAE+G DW+KID +LE
Sbjct: 266 EGVDGNNAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLE 307
>Glyma11g11240.1
Length = 377
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 7 RPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIEAKK 63
RP+LVL PR S +PFG ARPRE+VLA+KG DWKK+D ++E+ K
Sbjct: 248 RPKLVLQPRTLSVSNEGDNVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVK 304
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 85 DAVLKPRPKVNPFGEAKPREVLLAERGADWRKIDLELE 122
D V KP+ VNPFGEA+PRE +LAE+G DW+KID +LE
Sbjct: 265 DNVGKPK-GVNPFGEARPREQVLAEKGQDWKKIDEQLE 301