Miyakogusa Predicted Gene

Lj4g3v2704760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2704760.1 Non Chatacterized Hit- tr|B9SI30|B9SI30_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,61.25,2e-19,seg,NULL,NODE_52891_length_308_cov_20.983767.path2.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g07010.1                                                       155   6e-39
Glyma11g27050.1                                                       155   1e-38

>Glyma18g07010.1 
          Length = 464

 Score =  155 bits (393), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 71/87 (81%), Positives = 77/87 (88%)

Query: 1  MGHSSKHYPRSPTYLYPSVVALSLFSITVLLLYKVDDVVSRTGTVVGHNLEPTPWHVFPH 60
          MG SSKH PRSPTYL P V+AL+LFS+T LLLYKVDDV SRTGTVVGHNLEPTPWHVFPH
Sbjct: 1  MGPSSKHTPRSPTYLIPCVIALALFSLTGLLLYKVDDVASRTGTVVGHNLEPTPWHVFPH 60

Query: 61 KTFDEESRHGRAYKIIQCSYLTCRYSS 87
          K FDEESR  R YKI+QCSYLTCRY++
Sbjct: 61 KPFDEESRQQRTYKILQCSYLTCRYAA 87


>Glyma11g27050.1 
          Length = 464

 Score =  155 bits (392), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/87 (81%), Positives = 77/87 (88%)

Query: 1  MGHSSKHYPRSPTYLYPSVVALSLFSITVLLLYKVDDVVSRTGTVVGHNLEPTPWHVFPH 60
          MG SS H PRSPTYL P V+AL+LFS+T LLLYKVDDV SRTGTVVGHNLEPTPWHVFPH
Sbjct: 1  MGPSSTHTPRSPTYLIPCVIALALFSLTGLLLYKVDDVASRTGTVVGHNLEPTPWHVFPH 60

Query: 61 KTFDEESRHGRAYKIIQCSYLTCRYSS 87
          K FDEESR  RAYKI+QCSYLTCRY++
Sbjct: 61 KPFDEESRQQRAYKILQCSYLTCRYAA 87