Miyakogusa Predicted Gene

Lj4g3v2641070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2641070.1 Non Chatacterized Hit- tr|I1JNA0|I1JNA0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,35.21,0.00008,seg,NULL,
NODE_83469_length_910_cov_25.034065.path2.1
         (287 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g31640.1                                                        78   1e-14

>Glyma19g31640.1 
          Length = 1149

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 115/272 (42%), Gaps = 42/272 (15%)

Query: 2   SPAAIHLQSPIKSSTDTTSHPS----FNADVLNPSTARGRSR------PRLVKLRKQS-- 49
           S AA+HLQSPI  S+D     S    FNAD LNPS A   S       PRL KLRKQS  
Sbjct: 3   SSAAVHLQSPINHSSDAPPPHSPFLYFNADCLNPSAAAAASAARTRSRPRLAKLRKQSAS 62

Query: 50  --ARSRGRTTXXXXXXXXXXXXFNPFRSDQVTGSFSRAESGDGANDGGCGSENPNRHRGF 107
             ARS  RT+            FNPFRSDQVT       +G+  N+ G  S         
Sbjct: 63  QQARSWSRTSATGHDGSGACAGFNPFRSDQVT-------TGN-VNNSGVES--------- 105

Query: 108 GREGFVFTARNRDSGSARDLNXXXXXXXXXXXCRKGESVEFVFCAKRSDVESVSPXXXXX 167
           G +GFVF A    S SARDL              K   VEFVF AK+   + +       
Sbjct: 106 GSDGFVFAAGKGGSDSARDLKGPSEGEIG-----KSGGVEFVFSAKKRSEDELKKKNENV 160

Query: 168 XXXXXXXXXXFDSAGFVFXXXXXXXXXXXXVEMGKTSLGVGNSGLVDDDEERGSKDEVAG 227
                      ++   VF             E GK+ + VG+    D+   R  K E+  
Sbjct: 161 AEAGEQGES--NTRELVFGACRNNLDSGLNTEKGKSGVPVGDPRF-DNGGVRECKTEL-- 215

Query: 228 DKNGSSKTSSVNMKQQESVDGLRNSTHGVGVF 259
            + G    S+ N+++ E V  + NS  G+G F
Sbjct: 216 -ECGKRDCSANNVEKPEHVGSVWNSDCGMGAF 246