Miyakogusa Predicted Gene

Lj4g3v2630970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2630970.1 Non Chatacterized Hit- tr|B7ZY82|B7ZY82_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55.29,4e-19,seg,NULL;
WCOR413,Cold acclimation WCOR413,CUFF.51404.1
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g12900.2                                                       208   5e-54
Glyma08g12900.1                                                       206   1e-53

>Glyma08g12900.2 
          Length = 218

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/180 (61%), Positives = 127/180 (70%), Gaps = 12/180 (6%)

Query: 58  LRSPIGHGGIGSMVKPRTSNNRSSGFRVLCYA-RPFAPPNLQWIAAVSSLVLILAKGTTV 116
           LRS IGHGG           +RS GFRV CYA  P  PPNLQWI+ +SS+VLILA+GT V
Sbjct: 50  LRSFIGHGG-----------SRSPGFRVHCYAPAPLTPPNLQWISTISSVVLILARGTAV 98

Query: 117 PKSFIVPLFALQAPAGFIAWIKGSYGMWXXXXXXXXXXXXYIPGXXXXXXXXXXXXXXXX 176
           PKS+IVPLFALQAPAG ++WIKG YG+W            YIPG                
Sbjct: 99  PKSYIVPLFALQAPAGVVSWIKGRYGVWTAFLALLIRLFFYIPGELELPFLALLLLMVAP 158

Query: 177 YEAMKFRDTKEGAFISLLIAVYLAYQHFSRTSLQKSFDQGSVVATLAVICITLVSLMLVL 236
           YEAMK R TKEGA ISLLI+VYLA+QHFSRTSLQ+SFDQGS+VATLAVICIT+VSL+L++
Sbjct: 159 YEAMKLRYTKEGAVISLLISVYLAFQHFSRTSLQQSFDQGSIVATLAVICITVVSLLLLI 218


>Glyma08g12900.1 
          Length = 219

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/179 (60%), Positives = 126/179 (70%), Gaps = 12/179 (6%)

Query: 59  RSPIGHGGIGSMVKPRTSNNRSSGFRVLCYA-RPFAPPNLQWIAAVSSLVLILAKGTTVP 117
           RS IGHGG           +RS GFRV CYA  P  PPNLQWI+ +SS+VLILA+GT VP
Sbjct: 52  RSFIGHGG-----------SRSPGFRVHCYAPAPLTPPNLQWISTISSVVLILARGTAVP 100

Query: 118 KSFIVPLFALQAPAGFIAWIKGSYGMWXXXXXXXXXXXXYIPGXXXXXXXXXXXXXXXXY 177
           KS+IVPLFALQAPAG ++WIKG YG+W            YIPG                Y
Sbjct: 101 KSYIVPLFALQAPAGVVSWIKGRYGVWTAFLALLIRLFFYIPGELELPFLALLLLMVAPY 160

Query: 178 EAMKFRDTKEGAFISLLIAVYLAYQHFSRTSLQKSFDQGSVVATLAVICITLVSLMLVL 236
           EAMK R TKEGA ISLLI+VYLA+QHFSRTSLQ+SFDQGS+VATLAVICIT+VSL+L++
Sbjct: 161 EAMKLRYTKEGAVISLLISVYLAFQHFSRTSLQQSFDQGSIVATLAVICITVVSLLLLI 219