Miyakogusa Predicted Gene

Lj4g3v2629890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2629890.1 Non Chatacterized Hit- tr|I1KSK4|I1KSK4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33378
PE,71.26,0,TPR-like,NULL; HAT (Half-A-TPR) repeats,RNA-processing
protein, HAT helix; seg,NULL; SUBFAMILY NOT N,CUFF.51393.1
         (1165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g12860.1                                                      1268   0.0  
Glyma03g32410.1                                                       336   1e-91
Glyma19g35140.2                                                       323   5e-88
Glyma19g35140.1                                                       317   4e-86
Glyma19g35140.3                                                       264   5e-70
Glyma05g29750.1                                                        93   2e-18

>Glyma08g12860.1 
          Length = 1079

 Score = 1268 bits (3282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/957 (68%), Positives = 732/957 (76%), Gaps = 40/957 (4%)

Query: 4   LCPTLSFATDDNVELEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSKFPL 63
           + P LS A+DDN++L++V+SKGSL FDEWT+LISEI+  YPD  EKICLVY+HFLSKFPL
Sbjct: 1   MAPILSSASDDNLDLQEVISKGSLDFDEWTLLISEIEKLYPDDAEKICLVYNHFLSKFPL 60

Query: 64  CYGYWRKYAAHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIRRLF 123
           C+GYWRKYAAHM  LC  DKVVEVFE+AVLAATYSVGMWVDYCSFGM AFE+PSDIRRLF
Sbjct: 61  CHGYWRKYAAHMTCLCTTDKVVEVFEKAVLAATYSVGMWVDYCSFGMSAFEDPSDIRRLF 120

Query: 124 KRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVYIQTLKFPTKKLHQYYDSFKKLAT 183
           KRAISFVGKDYLCH LWDKYI FEFSQQQWISLAH+YIQTLKFPTKKL+QYYDSFKKL T
Sbjct: 121 KRAISFVGKDYLCHILWDKYIHFEFSQQQWISLAHIYIQTLKFPTKKLNQYYDSFKKLLT 180

Query: 184 FLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEIYCIIKDMMDSSVGMACSIAVKKY 243
           FLEEG+ SL+     LQSESCFDGEIPMT C KDDEIYCII D+MDSSVG+  SIA+K+Y
Sbjct: 181 FLEEGIASLE-----LQSESCFDGEIPMTTCYKDDEIYCIINDIMDSSVGLTSSIALKRY 235

Query: 244 RVIGEQLYHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAV 303
           RVIGE LYH ACELYSKIS FEANI RHYFHV+PLDA QLQNWH+YLDFIE QGDFDWAV
Sbjct: 236 RVIGELLYHKACELYSKISPFEANIRRHYFHVRPLDANQLQNWHNYLDFIEPQGDFDWAV 295

Query: 304 KLYERCLIVCANYSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKE 363
           KLYERCLIVCANY +YWMRYVDFMEAKGGREIANYSL RATEIYLK VP IH FNARFKE
Sbjct: 296 KLYERCLIVCANYPEYWMRYVDFMEAKGGREIANYSLVRATEIYLKKVPEIHLFNARFKE 355

Query: 364 QIGDVIAARALYIQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXXXXX 423
           QIGDV+AARA YIQ GK TDSDFVE+V S ANMEKRLGN ESAF+IYK            
Sbjct: 356 QIGDVLAARAAYIQSGKETDSDFVENVISKANMEKRLGNTESAFSIYKEALKMASAEKML 415

Query: 424 XXXPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKHITL 483
              P+LY+H SRLKY+STNS DA+ DVLIDG+RTLP NKLLLEELIKF M+HGGTKH+ +
Sbjct: 416 HALPILYVHFSRLKYLSTNSVDAAGDVLIDGVRTLPQNKLLLEELIKFLMMHGGTKHMAV 475

Query: 484 IDTIIADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLFPGSTR 543
           ID+IIAD +SPRS+ SQG  TEDAEDIS LYLEFVDYCGTIHDV+KAWNRH+KLFP S R
Sbjct: 476 IDSIIADTISPRSEGSQGFSTEDAEDISNLYLEFVDYCGTIHDVRKAWNRHIKLFPDSVR 535

Query: 544 IDFRHQSAKCQGSLNLIQHKREEVLVALPNQASRDSSSDMHA--NLPQENRKVSSEYCDT 601
                 +AK +  +NL+  KREEV V +PNQASRDSSSD+ A     ++ + +  +YCD 
Sbjct: 536 ------TAKRRRLINLMD-KREEVFVVMPNQASRDSSSDLDAAHLHKKDKKVLLLKYCDN 588

Query: 602 QLDPTADEL----NHITQS-NDTDMHGLQIMESDDKAGNNGRDLALP--EEPRDNGPENK 654
           Q D T DEL    NH  +S NDTD   LQIMES+ K   NGR+L LP  EEPRDN PEN 
Sbjct: 589 QSDATKDELMLTKNHNARSNNDTDTCNLQIMESEYKIEENGRELPLPISEEPRDNDPENN 648

Query: 655 LPSADLVEVEEEPGLVDKNLKR-NCSESDVSSENLLQQTASGNKS---LKASSNENAVFS 710
           + SA+LVEV+E    + KNLK    SESDVSSE LL+QTA GN+S   L+  S EN  FS
Sbjct: 649 VSSANLVEVKERS--ITKNLKNSCSSESDVSSEELLRQTACGNQSSQALQIPSKENTAFS 706

Query: 711 Q--CELETEE----------LNPRESTCPDSELMTSQEECDTIPERSKLNSRTVAGGHTS 758
           +  CELE EE          LNP+ESTCPDS  M SQEECD IPE  K NSR V GGHT+
Sbjct: 707 KGTCELEPEELKPLSPSSISLNPQESTCPDSGPMVSQEECDAIPESCKSNSRAVVGGHTT 766

Query: 759 NQDNSASTQDSESAQTHVEINNSYSACHQDERARRSLLPPRFSRNSDGKWHQKRNTGNFR 818
           NQDNSASTQDSESAQ  +EIN+ YSA H+D+RAR+ LLPPR S NS G WH+ RN G FR
Sbjct: 767 NQDNSASTQDSESAQIPIEINSPYSARHRDQRARKPLLPPRSSGNSGGNWHKMRNAGQFR 826

Query: 819 RGHKYGHREYTHRKXXXXXXXXXXXXXXAGGGPQLPVTPGY-AQSEMXXXXXXXXXXXXX 877
           RG K+G+R  THRK                 G Q+ V PGY +Q  +             
Sbjct: 827 RGPKFGYRGNTHRKQHQRQQLPPQQIHPPERGSQMAVAPGYSSQPVLQIQQCNQGQNQFH 886

Query: 878 XXSTPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQHPMQGNVQYGYMQNGQE 934
             +TP DF A   WP+QN+ IQN+ SQSQ+PAN TSHV QH MQGN +YGYMQN QE
Sbjct: 887 SAATPTDFAAASCWPMQNMQIQNTSSQSQTPANTTSHVLQHAMQGNERYGYMQNDQE 943


>Glyma03g32410.1 
          Length = 898

 Score =  336 bits (861), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 201/590 (34%), Positives = 293/590 (49%), Gaps = 69/590 (11%)

Query: 18  LEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSKFPLCYGYWRKYAAHMAR 77
           L ++V   SL F  WT LI E +    D + KI  VYD FL++FPLCYGYW+KYA H AR
Sbjct: 162 LWNIVRANSLDFTAWTSLIEETEKAAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEAR 221

Query: 78  LCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIRRLFKRAIS--------- 128
           L   DKVVEV+E+AV   TYSV MW+ YC F +  + +P  +RR+    IS         
Sbjct: 222 LGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRRMRATVISPLYGGKALM 281

Query: 129 ---------FVGKDYLCHTL--------WDKYIQFE----FS-------QQQWI----SL 156
                     + K Y+   L        W  Y+       FS          W      L
Sbjct: 282 GLHARMFSILMFKSYVLSPLFVEGKCSVWMSYMMLRVICLFSLNTSAAVSHTWTLFERGL 341

Query: 157 AHVYIQTLKFPTKKLHQYYDSFKKLATFLEEGMTSLDNSPKQ-----LQSESCFDGEIPM 211
           A+V    L FP    +  Y+  ++    L    T +  +P Q       S     G  P+
Sbjct: 342 AYVGTDYLSFPLWDKYIEYEYMQQDWARLAVIYTRILENPNQQLDRYFSSFKELAGNRPL 401

Query: 212 TMCCKDDEIYCIIKDMMDS---------------------SVGMACSIAVKKYRVIGEQL 250
           +     DE   +     ++                     S G+  +  ++KY  I E++
Sbjct: 402 SELRTADEAAAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEM 461

Query: 251 YHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCL 310
           Y  A E  SKI  FE  I R YFHV+PL+  +L+NWH+YLDFIE +GD    VKLYERC+
Sbjct: 462 YKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCV 521

Query: 311 IVCANYSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKEQIGDVIA 370
           I CANY +YW+RYV  MEA G  ++AN  L RAT++++K  P IH F ARFKEQ GD+  
Sbjct: 522 IACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHIFCARFKEQTGDIDG 581

Query: 371 ARALYIQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXXXXXXXXPLLY 430
           ARA Y      T    +E++   ANME RL  ME AF++Y+               P+L+
Sbjct: 582 ARAAYQLVHTETSPGLLEAIIKHANMEYRLEKMEDAFSLYEQAIAIEKGKEHSQTLPMLF 641

Query: 431 IHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH--ITLIDTII 488
              SR  Y+++ + + +R +L++G+  +  +K LLE ++ F  +    K   I  +++ +
Sbjct: 642 AQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEAILHFEAIQPLPKRVDIDFLESWV 701

Query: 489 ADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLF 538
              + P S+        + E++S ++LEF++  G +  +K+A +RH KLF
Sbjct: 702 VKFIMPNSESPGVASATEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLF 751


>Glyma19g35140.2 
          Length = 585

 Score =  323 bits (829), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 165/442 (37%), Positives = 257/442 (58%), Gaps = 9/442 (2%)

Query: 101 MWVDYCSFGMLAFEEPSDIRRLFKRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVY 160
           MW+ YC F +  + +P+ +RRLF+R +++VG DYL   LWDKYI++E+ QQ W  LA +Y
Sbjct: 1   MWLHYCIFAISTYGDPNTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWACLAVIY 60

Query: 161 IQTLKFPTKKLHQYYDSFKKLATFLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEI 220
            + L+ P ++L +Y+ SFK+LA     G   L       ++ +        T    + E+
Sbjct: 61  TRILENPNQQLDRYFSSFKELA-----GNRPLSELRTADEAAAVAGVASEATGQATEGEV 115

Query: 221 YCIIKDMMDSSV--GMACSIAVKKYRVIGEQLYHNACELYSKISSFEANIERHYFHVQPL 278
           +    +    SV  G+  +  ++KY  I E++Y  A E  SKI  FE  I R YFHV+PL
Sbjct: 116 HPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPL 175

Query: 279 DAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYSDYWMRYVDFMEAKGGREIANY 338
           +  +L+NWH+YLDFIE +GD    VKLYERC+I CANY +YW+RYV  MEA G  ++AN 
Sbjct: 176 NVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANN 235

Query: 339 SLDRATEIYLKSVPAIHSFNARFKEQIGDVIAARALYIQRGKGTDSDFVESVKSIANMEK 398
            L RAT++++K  P IH F ARFKEQ GD+  ARA Y      T    +E++   ANME 
Sbjct: 236 VLARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIKHANMEY 295

Query: 399 RLGNMESAFNIYKXXXXXXXXXXXXXXXPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTL 458
           RLG ME AF++Y+               P+L+   SR  Y+++ + + +R +L++G+  +
Sbjct: 296 RLGKMEDAFSLYEHAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENV 355

Query: 459 PPNKLLLEELIKFSMVHGGTKHITL--IDTIIADALSPRSDESQGLGTEDAEDISKLYLE 516
             +K LLE L+ F  +    K + +  +++ +   + P S+ +      + E++S ++LE
Sbjct: 356 LLSKPLLEALLHFEAIQPLPKRVGVDFLESWVVKFIMPNSESAGVASPTEREELSSIFLE 415

Query: 517 FVDYCGTIHDVKKAWNRHMKLF 538
           F++  G +  +K+A +RH KLF
Sbjct: 416 FLNLFGDVQSIKRAEDRHAKLF 437


>Glyma19g35140.1 
          Length = 932

 Score =  317 bits (813), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 201/624 (32%), Positives = 298/624 (47%), Gaps = 104/624 (16%)

Query: 18  LEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSKFPLCYGYWRKYAAHMAR 77
           L ++V   SL F  WT LI E + T  D + KI  VYD FL++FPLCYGYW+KYA H AR
Sbjct: 162 LWNIVRANSLDFTAWTSLIEETEKT-EDNILKIRRVYDAFLAEFPLCYGYWKKYADHEAR 220

Query: 78  LCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIRR---------------- 121
           L   DKVVEV+E+AV   TYSV MW+ YC F +  + +P+ +RR                
Sbjct: 221 LGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPNTVRRIRATVISPLYGGKALM 280

Query: 122 -LFKRAISFVGKDYLCH---------TLWDKYIQFE----FSQQQWISLAHVY--IQTLK 165
            L  R  S +   YL           ++W  Y+       FS     ++ H +  I  L 
Sbjct: 281 GLHARMFSILMFKYLVLSPLFVEGKCSVWMSYMMLRVICLFSLNTSAAVYHTWMCINYLS 340

Query: 166 FPTKKLHQYYDSFKKLATFLEEGMTSLDNSPKQ-----LQSESCFDGEIPMTMCCKDDEI 220
           FP    +  Y+  ++    L    T +  +P Q       S     G  P++     DE 
Sbjct: 341 FPLWDKYIEYEYMQQDWACLAVIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADEA 400

Query: 221 YCIIKDMMDS---------------------SVGMACSIAVKKYRVIGEQLYHNACELYS 259
             +     ++                     S G+  +  ++KY  I E++Y  A E  S
Sbjct: 401 AAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDS 460

Query: 260 KISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYSDY 319
           KI  FE  I R YFHV+PL+  +L+NWH+YLDFIE +GD    VKLYERC+I CANY +Y
Sbjct: 461 KIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEY 520

Query: 320 WMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKEQIGDVIAARALYIQRG 379
           W+RYV  MEA G  ++AN  L RAT++++K  P IH F ARFKEQ GD+  ARA Y    
Sbjct: 521 WIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVH 580

Query: 380 KGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXXXXXXXXPLLYIHLSRLKYM 439
             T    +E++   ANME RLG ME AF++Y+               P+L+   SR  Y+
Sbjct: 581 TETSPGLLEAIIKHANMEYRLGKMEDAFSLYEHAIAIEKGKEHSQTLPMLFAQYSRFVYL 640

Query: 440 STNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKHITL--IDTIIADALSPRSD 497
           ++ + + +R +L++G+  +  +K LLE L+ F  +    K + +  +++ +   + P S+
Sbjct: 641 ASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVGVDFLESWVVKFIMPNSE 700

Query: 498 ESQGLGTEDAEDISKLYLE----------------------------------------- 516
            +      + E++S ++LE                                         
Sbjct: 701 SAGVASPTEREELSSIFLEASVCICVLGLRSVGICMHLCLISYFDTNLVHRTNLIGELMC 760

Query: 517 --FVDYCGTIHDVKKAWNRHMKLF 538
             F++  G +  +K+A +RH KLF
Sbjct: 761 VAFLNLFGDVQSIKRAEDRHAKLF 784


>Glyma19g35140.3 
          Length = 537

 Score =  264 bits (674), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 142/393 (36%), Positives = 221/393 (56%), Gaps = 9/393 (2%)

Query: 150 QQQWISLAHVYIQTLKFPTKKLHQYYDSFKKLATFLEEGMTSLDNSPKQLQSESCFDGEI 209
           QQ W  LA +Y + L+ P ++L +Y+ SFK+LA     G   L       ++ +      
Sbjct: 2   QQDWACLAVIYTRILENPNQQLDRYFSSFKELA-----GNRPLSELRTADEAAAVAGVAS 56

Query: 210 PMTMCCKDDEIYCIIKDMMDSSV--GMACSIAVKKYRVIGEQLYHNACELYSKISSFEAN 267
             T    + E++    +    SV  G+  +  ++KY  I E++Y  A E  SKI  FE  
Sbjct: 57  EATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETA 116

Query: 268 IERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYSDYWMRYVDFM 327
           I R YFHV+PL+  +L+NWH+YLDFIE +GD    VKLYERC+I CANY +YW+RYV  M
Sbjct: 117 IRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCM 176

Query: 328 EAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKEQIGDVIAARALYIQRGKGTDSDFV 387
           EA G  ++AN  L RAT++++K  P IH F ARFKEQ GD+  ARA Y      T    +
Sbjct: 177 EASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVHTETSPGLL 236

Query: 388 ESVKSIANMEKRLGNMESAFNIYKXXXXXXXXXXXXXXXPLLYIHLSRLKYMSTNSEDAS 447
           E++   ANME RLG ME AF++Y+               P+L+   SR  Y+++ + + +
Sbjct: 237 EAIIKHANMEYRLGKMEDAFSLYEHAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKA 296

Query: 448 RDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKHITL--IDTIIADALSPRSDESQGLGTE 505
           R +L++G+  +  +K LLE L+ F  +    K + +  +++ +   + P S+ +      
Sbjct: 297 RQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVGVDFLESWVVKFIMPNSESAGVASPT 356

Query: 506 DAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLF 538
           + E++S ++LEF++  G +  +K+A +RH KLF
Sbjct: 357 EREELSSIFLEFLNLFGDVQSIKRAEDRHAKLF 389


>Glyma05g29750.1 
          Length = 161

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query: 880 STPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQHPMQGNVQYGYMQNGQEHNQMW 939
           +TP DF A + WP+QN+ IQN+ SQSQ+PAN TSHV QH MQGN QYGYMQNGQE+N +W
Sbjct: 30  TTPTDFAAVNCWPMQNMQIQNTSSQSQTPANTTSHVLQHAMQGNEQYGYMQNGQEYNHLW 89