Miyakogusa Predicted Gene

Lj4g3v2628880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2628880.1 tr|A9RJS7|A9RJS7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_203101,20,0.000001,Nucleotide-diphospho-sugar
transferases,NULL; seg,NULL; no description,NULL,CUFF.51384.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g29740.1                                                       242   1e-64
Glyma08g12850.1                                                       237   3e-63

>Glyma05g29740.1 
          Length = 700

 Score =  242 bits (618), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 114/154 (74%), Positives = 129/154 (83%)

Query: 1   MKSPWEILESPVGSGGLISLFSKHGIADDLMNMGVEYIELCCPNERIXXXXXXXXXXXXX 60
           MKSPWEIL+SPVGSGGLISLFSKH I D+L++MGVEYIE CCP+ER              
Sbjct: 547 MKSPWEILQSPVGSGGLISLFSKHSIVDNLIDMGVEYIEFCCPSERTAGGNSLLFGLINS 606

Query: 61  RTAKIGIQISPTIADLDENFDMILSMDFVKKLTKQSNKLQFDATPKTNSYVEKVDKDWVT 120
           R AKIGIQISP I DL+ENFDMI SMDFVKKLTKQSNKLQFDA PK +S+VEKVDK+WVT
Sbjct: 607 REAKIGIQISPKITDLEENFDMIFSMDFVKKLTKQSNKLQFDAIPKAHSFVEKVDKEWVT 666

Query: 121 VTSTTPNSYELSCSIYNSLNLCSLDQVCMVQVRE 154
           VTS+TPNSYELSCSI++SLN CSLD+VC+V+V E
Sbjct: 667 VTSSTPNSYELSCSIHDSLNACSLDKVCIVEVTE 700


>Glyma08g12850.1 
          Length = 670

 Score =  237 bits (605), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 111/154 (72%), Positives = 130/154 (84%)

Query: 1   MKSPWEILESPVGSGGLISLFSKHGIADDLMNMGVEYIELCCPNERIXXXXXXXXXXXXX 60
           MKSPWEIL+SPVGSGGLISLFS H IAD+L++MGVEYIE+CC +E++             
Sbjct: 517 MKSPWEILQSPVGSGGLISLFSNHSIADNLIDMGVEYIEVCCTSEKMAGGNSLLLGLINS 576

Query: 61  RTAKIGIQISPTIADLDENFDMILSMDFVKKLTKQSNKLQFDATPKTNSYVEKVDKDWVT 120
           R AKIGIQISP I D +ENFD+I SMDFVKKLTKQSNKLQFDA PK +S+VEKVDK+WVT
Sbjct: 577 REAKIGIQISPKITDSEENFDLIFSMDFVKKLTKQSNKLQFDAIPKAHSFVEKVDKEWVT 636

Query: 121 VTSTTPNSYELSCSIYNSLNLCSLDQVCMVQVRE 154
           +TS+TPNSYELSCSIY+SLN CSLD+VC+V+VRE
Sbjct: 637 LTSSTPNSYELSCSIYSSLNACSLDKVCIVEVRE 670