Miyakogusa Predicted Gene

Lj4g3v2628740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2628740.1 tr|B9H2B9|B9H2B9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_858427 PE=4 SV=1,52.48,2e-17,
,CUFF.51364.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g12760.1                                                       148   1e-36
Glyma05g29650.1                                                       141   2e-34
Glyma15g27480.1                                                        77   5e-15
Glyma13g33970.1                                                        64   4e-11
Glyma13g33970.2                                                        64   4e-11
Glyma12g36280.1                                                        63   6e-11

>Glyma08g12760.1 
          Length = 881

 Score =  148 bits (374), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/108 (71%), Positives = 91/108 (84%), Gaps = 6/108 (5%)

Query: 3   SNIYRPSTLPKI-STSKIGSKASRYKKQRSLSNIEKREIDRASGDPGRPTSRDRISLNEG 61
           SN YRPS+L K+ +T+K  SKA++YKKQRSLSNIEKRE+D+      RP   D+I+L+EG
Sbjct: 779 SNSYRPSSLSKLPATTKTSSKAAQYKKQRSLSNIEKRELDQ-----WRPMCGDKIALHEG 833

Query: 62  SSVLDLKGDNYFSCAVSRKRSTARYLLKTSDDVVNLLSDLADHSSSPS 109
           SSVLDLKGDNYFSC V RKRS+ARYLLKTSDDVVNLL DLA+HSSSP+
Sbjct: 834 SSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVVNLLRDLAEHSSSPT 881


>Glyma05g29650.1 
          Length = 569

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 81/96 (84%), Gaps = 5/96 (5%)

Query: 3   SNIYRPSTLPKISTSKIGSKASRYKKQRSLSNIEKREIDRASGDPGRPTSRDRISLNEGS 62
           SN YRPS+LPK+  +K GSKA++Y+KQRSLSNIEKREID+      RP  RD+I+L+EGS
Sbjct: 478 SNSYRPSSLPKLPATKTGSKAAKYRKQRSLSNIEKREIDQW-----RPKYRDKIALHEGS 532

Query: 63  SVLDLKGDNYFSCAVSRKRSTARYLLKTSDDVVNLL 98
           SVLDL GDNYFSC V RKRS+ARYLLKTSDDVVNLL
Sbjct: 533 SVLDLNGDNYFSCVVGRKRSSARYLLKTSDDVVNLL 568


>Glyma15g27480.1 
          Length = 895

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 5/93 (5%)

Query: 14  ISTSKIGSKASRYKKQRSLSNIEKREIDRASGDPGRPTSRDRISLNEGSSVLDLKGDNYF 73
           +  +K G K+   K QRS+SN EK+  +     P RP         E  +VLDLK +NYF
Sbjct: 804 VPATKSGPKSFPNKAQRSVSNSEKKTNNHICSTPRRPAPE-----KESWNVLDLKKENYF 858

Query: 74  SCAVSRKRSTARYLLKTSDDVVNLLSDLADHSS 106
           SCA+ R R+ ARY+L +SDDVV+ L +LA  SS
Sbjct: 859 SCAIGRTRTNARYILDSSDDVVSFLKELAVASS 891


>Glyma13g33970.1 
          Length = 933

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 6/100 (6%)

Query: 5   IYRPSTLPKISTSKIGSKASRYKK-QRSLSNIEKREIDRASGDPGRPTSRDRISLNEGSS 63
           + R S+L   ++    +K+S  KK QR +SN EK+  +     P R  + ++IS N    
Sbjct: 838 VERVSSLKNPASRNGAAKSSSQKKGQRPVSNNEKKRNNHVCRGP-RRLAPEKISWN---- 892

Query: 64  VLDLKGDNYFSCAVSRKRSTARYLLKTSDDVVNLLSDLAD 103
           VLDLK +NYFSCAV R ++ ARY L + D+VV  L +LA+
Sbjct: 893 VLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELAN 932


>Glyma13g33970.2 
          Length = 932

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 6/100 (6%)

Query: 5   IYRPSTLPKISTSKIGSKASRYKK-QRSLSNIEKREIDRASGDPGRPTSRDRISLNEGSS 63
           + R S+L   ++    +K+S  KK QR +SN EK+  +     P R  + ++IS N    
Sbjct: 837 VERVSSLKNPASRNGAAKSSSQKKGQRPVSNNEKKRNNHVCRGP-RRLAPEKISWN---- 891

Query: 64  VLDLKGDNYFSCAVSRKRSTARYLLKTSDDVVNLLSDLAD 103
           VLDLK +NYFSCAV R ++ ARY L + D+VV  L +LA+
Sbjct: 892 VLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELAN 931


>Glyma12g36280.1 
          Length = 907

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)

Query: 23  ASRYKKQRSLSNIEKREIDRASGDPGRPTSRDRISLNEGSSVLDLKGDNYFSCAVSRKRS 82
           +S+ K QR +SN EK+  +     P RP   ++IS N    VLDLK +NYFSCAV R ++
Sbjct: 828 SSQNKGQRPVSNSEKKTNNHVCRLPRRPAP-EKISWN----VLDLKKENYFSCAVGRTQT 882

Query: 83  TARYLLKTSDDVVNLLSDLADHSSS 107
            ARY L + D+VV  L +L   S S
Sbjct: 883 NARYTLASPDEVVAFLKELHTLSQS 907