Miyakogusa Predicted Gene

Lj4g3v2618500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2618500.1 Non Chatacterized Hit- tr|C6T6C4|C6T6C4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4 S,63.16,6e-18,
,CUFF.51344.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g29480.1                                                       109   5e-25
Glyma08g12640.1                                                       102   1e-22

>Glyma05g29480.1 
          Length = 92

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 62/75 (82%), Gaps = 2/75 (2%)

Query: 19 VCQPSHGVAEDSSTRRLFGSSRAI--PSCGELVLKSQCSQNSKCSWCTSQDLDDMCFSKS 76
          VCQPS G+ ED STRRL   +  +  PSCGELVLKSQCS+NSKC WCTS+DLDDMCFSKS
Sbjct: 17 VCQPSCGLGEDWSTRRLSRHNNKVIPPSCGELVLKSQCSENSKCRWCTSEDLDDMCFSKS 76

Query: 77 EALRLPNQVFSCGSV 91
          EALRLP+QVFSC  +
Sbjct: 77 EALRLPHQVFSCAFI 91


>Glyma08g12640.1 
          Length = 95

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 61/74 (82%), Gaps = 4/74 (5%)

Query: 20 CQPSHGVAEDSSTRRL---FGSSRAIP-SCGELVLKSQCSQNSKCSWCTSQDLDDMCFSK 75
          CQ S G+ ED STRRL     +++ IP SCGELVLKSQCS+NSKC WCTS+DLDDMCFSK
Sbjct: 22 CQLSCGLGEDWSTRRLSRHNNNNKVIPPSCGELVLKSQCSENSKCRWCTSEDLDDMCFSK 81

Query: 76 SEALRLPNQVFSCG 89
          SEALRLP+QVFSC 
Sbjct: 82 SEALRLPHQVFSCA 95