Miyakogusa Predicted Gene

Lj4g3v2606070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2606070.1 Non Chatacterized Hit- tr|H9VQK8|H9VQK8_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.42,2e-16,seg,NULL; DUF177,Protein of unknown function
DUF177,CUFF.51316.1
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g29270.1                                                       401   e-112
Glyma08g12430.1                                                       217   1e-56

>Glyma05g29270.1 
          Length = 318

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/316 (65%), Positives = 231/316 (73%), Gaps = 8/316 (2%)

Query: 1   MSLVIPSTTSSPFLQFSGWSFYNSNPQQKFTCN-SFTRLRHRMISRCKTRHFCAPFGNES 59
           MSLVIPS+ ++P L FS     + +  QKF    S T  +H++   CKTRH      NE 
Sbjct: 1   MSLVIPSSCAAP-LHFSQREIRSLSSHQKFASYYSITPFQHKVALSCKTRHIRTHLRNEL 59

Query: 60  SVVHKYATRSTNEGSGVI---SLDWDDDGEIEDAGSPWEGAVIYKRNASILHLEYCTTLE 116
           +V+HKYA RS       I   SL WDDD E+ED GSPWEGAVIYKRNA+ILHLEYCTTLE
Sbjct: 60  NVLHKYAVRSKGHDFESINDESLGWDDDEEVEDMGSPWEGAVIYKRNATILHLEYCTTLE 119

Query: 117 RLGLGNLSTDVSKSRAAVMGLRVTKAVKDYPNGTPVQISIDVARKKKKLRLDGIIKTVIG 176
           RLGL  LS+DVSK+RAA MGLRVTKAVKD+PNGTPVQISIDV RKKKKLRLDGIIKTVI 
Sbjct: 120 RLGLAKLSSDVSKTRAAAMGLRVTKAVKDFPNGTPVQISIDVTRKKKKLRLDGIIKTVIT 179

Query: 177 LLCNRCCMPSAXXXXXXXXXXXXXXPIVEPETIDLGVIFGEDKITTSGXX-XXXXXXXXX 235
           LLCNRCC PSA              PI EPETID+GVIFGEDK+TTSG            
Sbjct: 180 LLCNRCCAPSAESIFSEFSLLLTDEPIEEPETIDMGVIFGEDKLTTSGNSGEDDDDDALI 239

Query: 236 XXXXXXYFPPEEKHIDISKNIRDRVHLEITMNSVCDPGCKGMCLKCGQNFNTGNCNCS-- 293
                 YFPP+++ IDISKNIRDRVHLEITMNSVC PGCKGMCLKCGQNFNTGNCNCS  
Sbjct: 240 DMDDQLYFPPQQRQIDISKNIRDRVHLEITMNSVCGPGCKGMCLKCGQNFNTGNCNCSKE 299

Query: 294 QVKEKSYGPLGNLKEK 309
           +V+EKS+GPLGNLKEK
Sbjct: 300 EVQEKSFGPLGNLKEK 315


>Glyma08g12430.1 
          Length = 254

 Score =  217 bits (553), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 115/167 (68%), Positives = 123/167 (73%), Gaps = 4/167 (2%)

Query: 146 YPNGTPVQISIDVARKKKKLRLDGIIKTVIGLLCNRCCMPSAXXXXXXXXXXXXXXPIVE 205
           +PNGTPVQISIDV  KKKKLRLDGIIKTVI LLCNR C PSA              P+ E
Sbjct: 87  FPNGTPVQISIDVT-KKKKLRLDGIIKTVITLLCNRYCAPSAESIFSEFSLLLTDKPLEE 145

Query: 206 PETIDLGVIFGEDKITTSGXX-XXXXXXXXXXXXXXXYFPPEEKHIDISKNIRDRVHLEI 264
           PETID GVIFGEDK+TTSG                  YFPPE+K IDISKNIRDRVHLEI
Sbjct: 146 PETIDKGVIFGEDKLTTSGNSGEDDDDDALIDMDDQLYFPPEQKQIDISKNIRDRVHLEI 205

Query: 265 TMNSVCDPGCKGMCLKCGQNFNTGNCNCS--QVKEKSYGPLGNLKEK 309
           T+NSV  PGCKGMCLKCGQNFNTGNCNCS  +V+EKS+GPLGNLKEK
Sbjct: 206 TINSVYGPGCKGMCLKCGQNFNTGNCNCSKQEVQEKSFGPLGNLKEK 252