Miyakogusa Predicted Gene

Lj4g3v2604490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2604490.1 tr|F2CR04|F2CR04_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,36.28,2e-18,seg,NULL; no description,Thioredoxin-like fold;
Thioredoxin-like,Thioredoxin-like fold,CUFF.51283.1
         (367 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g29040.1                                                       423   e-118
Glyma08g12190.1                                                       337   9e-93
Glyma20g23290.1                                                       102   6e-22
Glyma12g22200.1                                                        64   2e-10
Glyma05g12820.1                                                        63   5e-10

>Glyma05g29040.1 
          Length = 373

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/302 (71%), Positives = 232/302 (76%), Gaps = 10/302 (3%)

Query: 66  QRAGTKGRGRRSQQPTEDVVSNNDGDKGSAEVFPTTIPRKPRRGRKSEAMKVEDFVRDTL 125
           QRA  K R R  Q  ++DVVS+N GDK SAE FPTTIPRKPRRGR+SEA+ VEDFVR +L
Sbjct: 82  QRARPKARSRSGQ--SKDVVSSN-GDKSSAETFPTTIPRKPRRGRRSEAVAVEDFVRGSL 138

Query: 126 DRTFAAIREQNADALEGHETILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
           +RTFAAIREQN DALE HE I+                                      
Sbjct: 139 ERTFAAIREQNKDALENHENIMKERDDDSSKSESGDKDDDNDDEEEDGGEGIRNKMVIEE 198

Query: 186 XXXXXXXXXXXWPVDADVGWGIRASEYFEKHPIKNVVGEDGVEIDWEGELDDCWVQEINC 245
                      WP+DADVGWGIRASEYFE+HPIKNVVGEDG EIDWEGE+DD WVQEINC
Sbjct: 199 ESKS-------WPLDADVGWGIRASEYFEQHPIKNVVGEDGYEIDWEGEIDDNWVQEINC 251

Query: 246 LEWESIAFHPSPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLPPRAVKIDINIE 305
           LEWES AFHPSPLIVLVFERYNRA+DNWK LKELEKAIKVYW AKDRLPPRAVKIDINIE
Sbjct: 252 LEWESFAFHPSPLIVLVFERYNRASDNWKILKELEKAIKVYWRAKDRLPPRAVKIDINIE 311

Query: 306 KDLAYALKVRECPQILFLRGNKVVYREKELRTADELVQMIAFFYYSAKKPAWIDDKALYS 365
           +DLAYALKVRECPQILFLRG++VVYREKELRTADELVQMIAFFYY+AKKPAWIDDKALY+
Sbjct: 312 RDLAYALKVRECPQILFLRGHRVVYREKELRTADELVQMIAFFYYNAKKPAWIDDKALYT 371

Query: 366 RY 367
           RY
Sbjct: 372 RY 373


>Glyma08g12190.1 
          Length = 319

 Score =  337 bits (865), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 157/171 (91%), Positives = 166/171 (97%)

Query: 197 WPVDADVGWGIRASEYFEKHPIKNVVGEDGVEIDWEGELDDCWVQEINCLEWESIAFHPS 256
           WP+DADVGWGIRASEYFEKHPIKNVVGEDG EIDWEGE+DD WVQEINCLEWES AFHPS
Sbjct: 149 WPLDADVGWGIRASEYFEKHPIKNVVGEDGYEIDWEGEIDDNWVQEINCLEWESFAFHPS 208

Query: 257 PLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLPPRAVKIDINIEKDLAYALKVRE 316
           PLIVLVFERYNRA+DNWKNLKELEKA+KV+WSAKDRLPPRAVKIDI IE+DLAYALKVRE
Sbjct: 209 PLIVLVFERYNRASDNWKNLKELEKAVKVFWSAKDRLPPRAVKIDIYIERDLAYALKVRE 268

Query: 317 CPQILFLRGNKVVYREKELRTADELVQMIAFFYYSAKKPAWIDDKALYSRY 367
           CPQILFLRGN+VVYREKELRTADELVQMIAFFYY+AKKPAWIDDKALY R+
Sbjct: 269 CPQILFLRGNRVVYREKELRTADELVQMIAFFYYNAKKPAWIDDKALYFRF 319



 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 78/156 (50%), Gaps = 26/156 (16%)

Query: 1   MLILQAAISPKRFPPFLTTKVDAGFQGFSHXXXXXXXXXXXXXNHHI-----------VK 49
           ML LQ  +  +RF PF     DA     S                H            + 
Sbjct: 1   MLFLQTTVLTRRFSPF----CDATLHPLSLLNVQNPMLECAHSFSHYSPVPSNRTVKSIS 56

Query: 50  CSVSTKSHSNPE-------PEPKQRAGTKGRGRRSQQPTEDVVSNNDGDKGSAEVFPTTI 102
           CSVS KSHS PE           QRAG K R R S QP +DV S+ND DK SAE FPTTI
Sbjct: 57  CSVSRKSHSKPEPEPPEPEANSNQRAGPKARSR-SHQP-KDVESSND-DKSSAETFPTTI 113

Query: 103 PRKPRRGRKSEAMKVEDFVRDTLDRTFAAIREQNAD 138
           PRKPRRGR+SEA+ VEDF RD + R    I E++ +
Sbjct: 114 PRKPRRGRRSEAVAVEDFERDGV-RNKMVIEEESKN 148


>Glyma20g23290.1 
          Length = 333

 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 14/168 (8%)

Query: 204 GWGIRASEYFEKHPIKNVVGE----------DGVEIDWEGELDDCWVQEINCLEWESIAF 253
           GWG    ++F+K  IKN   +          D  EI W+ +     +++I   EWE   F
Sbjct: 149 GWGFSLGQFFDKITIKNKKKDDDDDDDNDDVDRPEIMWQDDNYIRPIKDIKTAEWEETVF 208

Query: 254 HP-SPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLP-PRAVKIDINIEKDLAYA 311
              SPLI+LV  RY R  +N K   ELEKA+ + W+   RLP PR V ID  +E +L  A
Sbjct: 209 KDISPLIILVHNRYKRPKENEKIRDELEKAVHIIWNC--RLPSPRCVAIDAVVETELVAA 266

Query: 312 LKVRECPQILFLRGNKVVYREKELRTADELVQMIAFFYYSAKKPAWID 359
           L+V   P+I+F +  K+++R+K +R+A+E  +++A+FYY A KP+ ++
Sbjct: 267 LQVSIFPEIIFTKAGKILFRDKAIRSAEEWSKVMAYFYYGAAKPSCLN 314


>Glyma12g22200.1 
          Length = 109

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 32/42 (76%), Gaps = 1/42 (2%)

Query: 227 VEIDWEGELDDCWVQEINCLEWESIAFHPSPLIVLVFERYNR 268
           V ID    L  C V+EINCLEWES AFHPSPLIVLVFE YNR
Sbjct: 15  VIIDIVNALKKC-VEEINCLEWESFAFHPSPLIVLVFECYNR 55


>Glyma05g12820.1 
          Length = 48

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/29 (89%), Positives = 28/29 (96%)

Query: 240 VQEINCLEWESIAFHPSPLIVLVFERYNR 268
           V+EINCLEWES AFHPSPLI+LVFERYNR
Sbjct: 2   VEEINCLEWESFAFHPSPLIILVFERYNR 30