Miyakogusa Predicted Gene

Lj4g3v2604250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2604250.1 Non Chatacterized Hit- tr|C6TJQ3|C6TJQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40581 PE,88.48,0,pth:
peptidyl-tRNA hydrolase,Peptidyl-tRNA hydrolase;
Pept_tRNA_hydro_bact,Peptidyl-tRNA hydrolase; ,CUFF.51265.1
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g12110.1                                                       409   e-114
Glyma05g28940.1                                                       407   e-114
Glyma05g35220.1                                                       246   9e-66
Glyma18g53310.1                                                       243   1e-64
Glyma08g04500.1                                                       239   1e-63
Glyma08g48210.1                                                       205   3e-53
Glyma05g23140.1                                                       111   6e-25

>Glyma08g12110.1 
          Length = 218

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/217 (89%), Positives = 206/217 (94%)

Query: 1   MLNRLSKRCFSTLAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKA 60
           ML+RLS+RCF T  PRPWLFVGLGNPGDK+KGTRHNVGFEMIDAFAESQGI M+ +HSKA
Sbjct: 1   MLHRLSRRCFCTFTPRPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 61  IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKFPLNQVLVFHDDLNLPCGVLRLYD 120
           IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYK PLNQVLVFHDD+NLPCGVLRL+D
Sbjct: 61  IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHD 120

Query: 121 KGGHGCHKGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQ 180
           KGGHG HKGLKSVIY+FRGNREFPRLRIGIG PPGQMDPKAFLLQKFNVTARQRIDEALQ
Sbjct: 121 KGGHGSHKGLKSVIYNFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQ 180

Query: 181 EGVDALKILLSRGLEVSAKRFNKEQKYKHLRVQTLPV 217
           EG+DALK+LLS+GL  SAKRFNKEQKYKHLRVQ LPV
Sbjct: 181 EGIDALKLLLSKGLTESAKRFNKEQKYKHLRVQNLPV 217


>Glyma05g28940.1 
          Length = 217

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/217 (89%), Positives = 207/217 (95%)

Query: 1   MLNRLSKRCFSTLAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKA 60
           MLNRL++R F T+APRPWLFVGLGNPG+K+KGTRHNVGFEMIDAFAESQGI M+ +HSKA
Sbjct: 1   MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 61  IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKFPLNQVLVFHDDLNLPCGVLRLYD 120
           I GKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYK PLNQVLVFHDD+NLPCGVLRL+D
Sbjct: 61  ISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHD 120

Query: 121 KGGHGCHKGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQ 180
           KGGHG HKGLKSVIYHF+GNREFPRLRIGIG PPGQMDPKAFLLQKFNVTARQRIDEALQ
Sbjct: 121 KGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQ 180

Query: 181 EGVDALKILLSRGLEVSAKRFNKEQKYKHLRVQTLPV 217
           EGVDALK+LLS+GL VSAKRFNKEQKYKHLRVQ LPV
Sbjct: 181 EGVDALKLLLSKGLAVSAKRFNKEQKYKHLRVQNLPV 217


>Glyma05g35220.1 
          Length = 259

 Score =  246 bits (629), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 115/193 (59%), Positives = 143/193 (74%)

Query: 17  PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKAIFGKGFVGEVPVFLAK 76
           PWL VGLGNPG KY  TRHNVGFEM+D  AE++GI M  +  K++FGKGF+G+VPV LAK
Sbjct: 65  PWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVILAK 124

Query: 77  PQTYMNLSGESTGPLAAYYKFPLNQVLVFHDDLNLPCGVLRLYDKGGHGCHKGLKSVIYH 136
           PQTYMN SGES G + +YYK PL QVLV  DDL+LP   LRL  KGGHG H G+KSVI H
Sbjct: 125 PQTYMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINH 184

Query: 137 FRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKILLSRGLEV 196
           F+GN  FPRLRIGIG+PPG+MDP AF+L+ F    R+ ++  LQ+G++A++ILL  G + 
Sbjct: 185 FKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEGFDK 244

Query: 197 SAKRFNKEQKYKH 209
           SA   N  +K + 
Sbjct: 245 SATFVNSAKKIEQ 257


>Glyma18g53310.1 
          Length = 244

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 112/196 (57%), Positives = 146/196 (74%)

Query: 17  PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKAIFGKGFVGEVPVFLAK 76
           PWL +GLGNPG+KY GTRH VGFE+ID+ + ++GIQMN + SKA+ G G +GEVP+ LAK
Sbjct: 49  PWLIIGLGNPGNKYHGTRHKVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAK 108

Query: 77  PQTYMNLSGESTGPLAAYYKFPLNQVLVFHDDLNLPCGVLRLYDKGGHGCHKGLKSVIYH 136
           PQTYMN SGES GPLAAYY+ PL  +L+  D+ +LP GVLRL  KGGHG H GLK+V+ H
Sbjct: 109 PQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168

Query: 137 FRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKILLSRGLEV 196
             G   FPRL +GIG PPG MD +A+LLQKF+V  R++ID +L++ V A++ ++  G + 
Sbjct: 169 LDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQ 228

Query: 197 SAKRFNKEQKYKHLRV 212
              RFN  QKYK+ +V
Sbjct: 229 HVNRFNLGQKYKYHKV 244


>Glyma08g04500.1 
          Length = 235

 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 144/197 (73%), Gaps = 1/197 (0%)

Query: 14  APRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKAIFGKGFVGEVPVF 73
           A  PWL VGLGNPG KY  TRHNVGFEM+D  AE++GI M  +  KA+FGKGF+G+VPV 
Sbjct: 37  AASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKALFGKGFIGDVPVI 96

Query: 74  LAKPQTYMNLSGESTGPLAAYYKFPLNQVLVFHDDLNLPCGVLRLYDKGGHGCHKGLKSV 133
           LAKPQT+MNLSGES G + +YYK P+ QVLV  DDL+LP   L+L  KGGHG H G+KSV
Sbjct: 97  LAKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGHNGMKSV 156

Query: 134 IYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQR-IDEALQEGVDALKILLSR 192
           I HF+GN  FPRLRIGIG+PPG+MDP AF+L  F     +R ++  L++G++A++ILL  
Sbjct: 157 INHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFTKQKGKRYLNFTLRDGLEAVRILLLE 216

Query: 193 GLEVSAKRFNKEQKYKH 209
           G + SA   N  +K + 
Sbjct: 217 GFDKSATFVNSAKKIEQ 233


>Glyma08g48210.1 
          Length = 203

 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 104/201 (51%), Positives = 138/201 (68%), Gaps = 9/201 (4%)

Query: 17  PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKAIFGKGFV--GEVPVFL 74
           PWL VGLGNPG KY GTR NVGFE+ID  + ++GIQ+N + SKA+ G   +   EVP+ L
Sbjct: 7   PWLIVGLGNPGYKYHGTRDNVGFEIIDILSRAEGIQINTIQSKALIGISVLLEIEVPILL 66

Query: 75  AKPQTYMNLSGESTG---PLAAYYKFPLNQVLVFHDDLNLPCGVLRLYDKGGHGCHKGLK 131
           AKPQTYMN SGES     PLAAYY+ PL  +L+    + +   +LRL  KGGHG H GLK
Sbjct: 67  AKPQTYMNFSGESVSWAMPLAAYYQLPLRHILL----VCISYVILRLQPKGGHGHHNGLK 122

Query: 132 SVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKILLS 191
           +V+ H  G  +FPRL +GIG PPG MD +A+LLQKF+V  R++ID +L++ V A++ ++ 
Sbjct: 123 NVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVL 182

Query: 192 RGLEVSAKRFNKEQKYKHLRV 212
            G +    RFN  QKYK+ +V
Sbjct: 183 NGFDQHVNRFNLGQKYKYHKV 203


>Glyma05g23140.1 
          Length = 105

 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 58/67 (86%)

Query: 1  MLNRLSKRCFSTLAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIQMNELHSKA 60
          ML+RLS+ CF  + PRPWLF+GLGNP DK+KGT+HNVGFEMIDAFA+SQGI M+ +H KA
Sbjct: 1  MLHRLSRCCFCIVTPRPWLFMGLGNPSDKFKGTKHNVGFEMIDAFAKSQGIPMDTVHFKA 60

Query: 61 IFGKGFV 67
          IFGKG V
Sbjct: 61 IFGKGTV 67