Miyakogusa Predicted Gene
- Lj4g3v2603990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2603990.1 tr|Q0DMJ5|Q0DMJ5_ORYSJ Os03g0805500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g08055,65.62,3e-17,seg,NULL,TC67535.path2.1
(203 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g11980.1 271 5e-73
Glyma05g29030.1 258 3e-69
Glyma05g28850.1 146 2e-35
Glyma18g22800.1 114 5e-26
Glyma15g25170.1 114 6e-26
Glyma10g15510.1 49 5e-06
>Glyma08g11980.1
Length = 728
Score = 271 bits (692), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 160/203 (78%), Gaps = 8/203 (3%)
Query: 3 KKSIRELGVKDFVNAG-LSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSYP 61
+KS+RELGV+D VNAG L++AEAN+L VL D+LS + +P+ IW ++TRR LKPS+P
Sbjct: 2 EKSVRELGVQDLVNAGGLTLAEANELYHVLTDILSQS--QSPSHIWHQIVTRRLLKPSFP 59
Query: 62 HPLHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYK 121
H LHQ AS P YWFPS+EQS+ TNLGRLMETHA KLLG SYK
Sbjct: 60 HSLHQLLYYSVYHSAFHS----QHASLPHYWFPSIEQSKRTNLGRLMETHAPKLLGASYK 115
Query: 122 DPISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDT-SDPSKHGGTWFPGSVLN 180
DPI+SFHLF KFSVQHPQVYWSL+LKELS+SFVEPPKCILDT SDPSKHGGTW PGSVLN
Sbjct: 116 DPITSFHLFHKFSVQHPQVYWSLILKELSVSFVEPPKCILDTSSDPSKHGGTWLPGSVLN 175
Query: 181 IAECCLQPSGHPNKQDDSVAIVW 203
IA+CCLQP+ +P+K DD++A+VW
Sbjct: 176 IADCCLQPTPYPHKTDDTLAVVW 198
>Glyma05g29030.1
Length = 725
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 152/201 (75%), Gaps = 11/201 (5%)
Query: 4 KSIRELGVKDFVNAG-LSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSYPH 62
KS+ ELGV++ VNAG L V E N+L L+D+LS +P+ IWR ++TRR LKPSYPH
Sbjct: 3 KSVGELGVEELVNAGGLRVEEGNELYHALRDILSEF--QSPSHIWRQIVTRRLLKPSYPH 60
Query: 63 PLHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYKD 122
LHQ +S P Y FPSL+QS+ +NLGRLME H +LLGPSYKD
Sbjct: 61 SLHQLLYYSVYHS--------QHSSLPLYCFPSLDQSKRSNLGRLMEKHGPELLGPSYKD 112
Query: 123 PISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDTSDPSKHGGTWFPGSVLNIA 182
PI+S+ LF KFSVQHPQ+YWSLVLKELS+SFVEPPKCILDTSDPSKHGGTW PGSVLNIA
Sbjct: 113 PITSYPLFHKFSVQHPQLYWSLVLKELSVSFVEPPKCILDTSDPSKHGGTWLPGSVLNIA 172
Query: 183 ECCLQPSGHPNKQDDSVAIVW 203
+CCLQPS HP+K DD++AIVW
Sbjct: 173 DCCLQPSSHPHKTDDTLAIVW 193
>Glyma05g28850.1
Length = 454
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 80/101 (79%), Gaps = 7/101 (6%)
Query: 86 ASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYKDPISSFHLFQKFSVQHPQVYWSLV 145
+S P Y FPSLEQS+ TNLG LMETHA LLGPSYKDPI+SFHLF KF +YWSL+
Sbjct: 30 SSLPLYCFPSLEQSKHTNLGCLMETHAPNLLGPSYKDPITSFHLFHKFF-----LYWSLI 84
Query: 146 LKELSLSFVEPPKCILDTSDPSKHGGTWFP--GSVLNIAEC 184
LKELS+SFVEPPKCILDTSDPSKHGGTW P S L IA C
Sbjct: 85 LKELSVSFVEPPKCILDTSDPSKHGGTWLPVLSSTLLIAVC 125
>Glyma18g22800.1
Length = 727
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 4 KSIRELGVKDFVNAGLSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSYPHP 63
KS+ + V D + G++ +A L L +++ PA W+H ++ L P P
Sbjct: 5 KSLSSITVSDIESHGIAREDAATLHHGLAEIIETHGNGTPA-TWQH-VSNSILNPELPFS 62
Query: 64 LHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYKDP 123
HQ + S PP W P E + TN+ +L+E + L +YKDP
Sbjct: 63 FHQMLYYGCYK---------DYGSDPPAWIPDPESAALTNVWKLLERKGEEFLCSAYKDP 113
Query: 124 ISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDTS----DPSKH-GGTWFPGSV 178
I+SF FQKFSV +P++YW VL E+S+SF +PP+CIL S P H G W PG+
Sbjct: 114 ITSFDDFQKFSVSNPEIYWKCVLDEMSISFSKPPECILRDSPSGESPLSHPSGQWLPGAS 173
Query: 179 LNIAECCLQPSGHPNKQDDSVAIVW 203
+N A+ CL +G + D I+W
Sbjct: 174 INPAQNCLNVNGKRSLND--TVIIW 196
>Glyma15g25170.1
Length = 744
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 4 KSIRELGVKDFVNAGLSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSYPHP 63
KS+ + V D + G++ +A L L +++ PA W+H ++ L P P
Sbjct: 22 KSLSSITVSDIESHGIAREDAATLHQGLAEIIETHSNGTPA-TWQH-VSNSILNPELPFS 79
Query: 64 LHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYKDP 123
HQ + PP W P+ E + TN+ +L+E + LG +YKDP
Sbjct: 80 FHQMLYYGCYK---------DYGPDPPAWIPNRESAALTNVWQLLERKGEEFLGSAYKDP 130
Query: 124 ISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDTS----DPSKH-GGTWFPGSV 178
I+SF FQKFSV +P++YW V E+S+SF +PP+CIL S P H G W PG+
Sbjct: 131 ITSFDDFQKFSVSNPEIYWKCVWDEMSISFSKPPECILRDSPSGESPLSHPSGQWLPGAS 190
Query: 179 LNIAECCLQPSGHPNKQDDSVAIVW 203
+N A+ CL +G + D I+W
Sbjct: 191 INPAQNCLNVNGKRSLND--TVIIW 213
>Glyma10g15510.1
Length = 51
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 174 FPGSVLNIAECCLQPSGHPNKQDDSVAIVW 203
PGSVLNI + C+QPS HP K DDS+AI+W
Sbjct: 1 LPGSVLNIVDYCVQPSSHPCKLDDSLAIIW 30