Miyakogusa Predicted Gene

Lj4g3v2603920.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603920.2 tr|A9RER0|A9RER0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_158713,37.32,2e-17,seg,NULL,CUFF.51225.2
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g28800.1                                                       271   5e-73
Glyma08g11950.1                                                       269   2e-72

>Glyma05g28800.1 
          Length = 323

 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 151/228 (66%), Positives = 166/228 (72%), Gaps = 3/228 (1%)

Query: 1   MVINSERQLSLPEDTAELRYTGFQYDFQIEDVLLGEGSDMSMLELRPTLVTELEGTDPIS 60
           MVIN E Q S PED     YTGFQYDFQI+DVLLGEG D+SMLELRP+LVTELEG DPIS
Sbjct: 98  MVINCEGQPSGPEDGVP-TYTGFQYDFQIDDVLLGEGVDLSMLELRPSLVTELEGIDPIS 156

Query: 61  LFNKGVYDSSTLLLSTGISNEESMREYASLKFSLLFYDAVLTLIGTSIASLSAGENXXXX 120
           +FNKG+ D + LL S  ISNEESM+EYA LKFSLLFYDA+L L GTS+ASL AGEN    
Sbjct: 157 IFNKGLNDPN-LLSSPKISNEESMKEYADLKFSLLFYDAMLMLFGTSVASLLAGENAGIA 215

Query: 121 XXXXXXXXXXXXXXXQRSVDELPASELITSNKGGSNALFRGLKGPIXXXXXXXXXXXXXX 180
                          QRSVDELPASELIT++K  ++ALFRG+KGPI              
Sbjct: 216 FLIGGIGGFLYLLLLQRSVDELPASELITNDKERTDALFRGVKGPIASVALALGLAVIAS 275

Query: 181 RYSEGG-PVMFTPKDLIVGMMGFLACKVSVVLAAFKPITPGLKLPSDM 227
           RYS GG  VM TPKDLIVGM+GFLACKVSVVLAAFKPIT G KLPSDM
Sbjct: 276 RYSSGGLQVMLTPKDLIVGMLGFLACKVSVVLAAFKPITLGSKLPSDM 323


>Glyma08g11950.1 
          Length = 402

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/228 (65%), Positives = 167/228 (73%), Gaps = 3/228 (1%)

Query: 1   MVINSERQLSLPEDTAELRYTGFQYDFQIEDVLLGEGSDMSMLELRPTLVTELEGTDPIS 60
           MVI+ E + S  ED     YTGFQYDFQI+DVLLGEG+D+SMLELRP+LVTELEG DPIS
Sbjct: 177 MVISCEGKPSGLEDGVT-SYTGFQYDFQIDDVLLGEGTDLSMLELRPSLVTELEGIDPIS 235

Query: 61  LFNKGVYDSSTLLLSTGISNEESMREYASLKFSLLFYDAVLTLIGTSIASLSAGENXXXX 120
           +FNKG+ D  TL  S  ISNEESM+EYA LKFSLLFYDA+LTL GTS+ASLSAGEN    
Sbjct: 236 IFNKGLND-PTLFSSPKISNEESMKEYADLKFSLLFYDAMLTLFGTSVASLSAGENAGIA 294

Query: 121 XXXXXXXXXXXXXXXQRSVDELPASELITSNKGGSNALFRGLKGPIXXXXXXXXXXXXXX 180
                          QRSVDELPASELIT++KG ++ALFRG+KGPI              
Sbjct: 295 FLIGGIGGFLYLLLLQRSVDELPASELITNDKGRTDALFRGVKGPIASVALAIGLAVIAS 354

Query: 181 RYSEGG-PVMFTPKDLIVGMMGFLACKVSVVLAAFKPITPGLKLPSDM 227
           RYS G   +M TPKDLIVGMMGFLACKVSVVLAAFKPIT G KLPSDM
Sbjct: 355 RYSSGDLELMLTPKDLIVGMMGFLACKVSVVLAAFKPITLGPKLPSDM 402