Miyakogusa Predicted Gene

Lj4g3v2603860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603860.1 Non Chatacterized Hit- tr|H3JFB7|H3JFB7_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,34.04,0.00000000000002,Med10,Mediator complex, subunit Med10;
seg,NULL; NUT2,NULL; NUT2 AND UXT,NULL,CUFF.51220.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g16280.1                                                       254   5e-68
Glyma08g40780.1                                                       252   2e-67

>Glyma18g16280.1 
          Length = 190

 Score =  254 bits (648), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 123/159 (77%), Positives = 134/159 (84%), Gaps = 2/159 (1%)

Query: 36  GGYESIQELHQLDISIQRTLGIIHQLYLTVSTYNAAFQMPLLQRINVLVGELDTMVKLAE 95
           G  +S+Q+L+Q+  SIQ+TLG+IHQLYLTVST+NAAFQMPLLQRIN LV ELD MVKLAE
Sbjct: 34  GADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAE 93

Query: 96  KCNVQVPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALKDFRKHLFEELEQNF 155
           KCN+QVPMEVVNLIDDGKNPDEFTKDVIN+CIAKNQITKGKTDALK  RKHL EELEQNF
Sbjct: 94  KCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNF 153

Query: 156 PDEVETFRESXXXXXXXXXXXXXXXSALPNGDVRVKAEH 194
           PDEVETFRES               SALPNGDVRVK+EH
Sbjct: 154 PDEVETFRES--RTAAAAELKRQAQSALPNGDVRVKSEH 190


>Glyma08g40780.1 
          Length = 192

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 121/159 (76%), Positives = 132/159 (83%)

Query: 36  GGYESIQELHQLDISIQRTLGIIHQLYLTVSTYNAAFQMPLLQRINVLVGELDTMVKLAE 95
           G  +S+Q+L+Q+  SIQ+TLG+IHQLYLTVST+NAAFQMPLLQRIN LV ELD MVKLAE
Sbjct: 34  GADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAE 93

Query: 96  KCNVQVPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALKDFRKHLFEELEQNF 155
           KCN+QVPMEVVNLIDDGKNPDEFTKDVIN+CI KNQITKGKTDALK  RKHL EELE NF
Sbjct: 94  KCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIVKNQITKGKTDALKSLRKHLLEELEHNF 153

Query: 156 PDEVETFRESXXXXXXXXXXXXXXXSALPNGDVRVKAEH 194
           PDEVETFRES               SALPNGDVRVK+EH
Sbjct: 154 PDEVETFRESRAAAAAELKRQAQAQSALPNGDVRVKSEH 192