Miyakogusa Predicted Gene
- Lj4g3v2603760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2603760.1 tr|G7LHV5|G7LHV5_MEDTR Small ubiquitin-related
modifier OS=Medicago truncatula GN=MTR_8g085320 PE=4 ,46.32,1e-16,no
description,NULL; Rad60-SLD,Small ubiquitin-related modifier, SUMO;
Ubiquitin-like,NULL,gene.g57057.t1.1
(102 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g11770.3 105 1e-23
Glyma08g11770.2 105 1e-23
Glyma08g11770.1 105 1e-23
Glyma08g43290.1 78 2e-15
Glyma08g46500.2 78 3e-15
Glyma18g35450.1 77 3e-15
Glyma08g46500.1 67 3e-12
Glyma08g43290.2 55 2e-08
>Glyma08g11770.3
Length = 106
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 3 SSSQPSKRKAPTE-EAGPADYVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYE 61
S +P KRK+P + EA ++FSI QDGR ++FKVN +L F +CER NLEYE
Sbjct: 4 SRGRPPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYE 63
Query: 62 TMQFLHDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
TMQFL DG ++KGK TPKMLN+++ EI A HQ GGG
Sbjct: 64 TMQFLCDGIHIKGK-HTPKMLNMEDDAEIFAATHQVGGG 101
>Glyma08g11770.2
Length = 106
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 3 SSSQPSKRKAPTE-EAGPADYVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYE 61
S +P KRK+P + EA ++FSI QDGR ++FKVN +L F +CER NLEYE
Sbjct: 4 SRGRPPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYE 63
Query: 62 TMQFLHDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
TMQFL DG ++KGK TPKMLN+++ EI A HQ GGG
Sbjct: 64 TMQFLCDGIHIKGK-HTPKMLNMEDDAEIFAATHQVGGG 101
>Glyma08g11770.1
Length = 106
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 3 SSSQPSKRKAPTE-EAGPADYVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYE 61
S +P KRK+P + EA ++FSI QDGR ++FKVN +L F +CER NLEYE
Sbjct: 4 SRGRPPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYE 63
Query: 62 TMQFLHDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
TMQFL DG ++KGK TPKMLN+++ EI A HQ GGG
Sbjct: 64 TMQFLCDGIHIKGK-HTPKMLNMEDDAEIFAATHQVGGG 101
>Glyma08g43290.1
Length = 99
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 2 GSSSQPSKRKAPTEEAGPADYVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYE 61
G ++ + K PTE+ +++ +KGQDG ++FF++ + +L ++YC+R ++++
Sbjct: 3 GVTNNNEEDKKPTEQGA---HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFN 59
Query: 62 TMQFLHDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGGVA 102
++ FL DG+ ++ + QTP L +++GDEI A+ HQ+GG V
Sbjct: 60 SIAFLFDGRRLRAE-QTPDELEMEDGDEIDAMLHQTGGSVV 99
>Glyma08g46500.2
Length = 103
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Query: 10 RKAPTEEAGPAD---YVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYETMQFL 66
R + EE P+D +++ +KGQDG ++FF++ + +L ++YC+R ++++ ++ FL
Sbjct: 7 RGSQEEEKKPSDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 66
Query: 67 HDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
DG+ ++ + QTP L +++GDEI A+ HQ+GGG
Sbjct: 67 FDGRRLRAE-QTPDELEMEDGDEIDAMLHQTGGG 99
>Glyma18g35450.1
Length = 114
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Query: 10 RKAPTEEAGPAD---YVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYETMQFL 66
R + EE P+D +++ +KGQDG ++FF++ + +L ++YC+R ++++ ++ FL
Sbjct: 7 RGSQEEEKKPSDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 66
Query: 67 HDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
DG+ ++ + QTP L +++GDEI A+ HQ+GGG
Sbjct: 67 FDGRRLRAE-QTPDELEMEDGDEIDAMLHQTGGG 99
>Glyma08g46500.1
Length = 117
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 18/108 (16%)
Query: 10 RKAPTEEAGPAD---YVHFSIKGQ--------------DGRQLFFKVNKEAKLFNAFSSY 52
R + EE P+D +++ +KGQ DG ++FF++ + +L ++Y
Sbjct: 7 RGSQEEEKKPSDQGAHINLKVKGQVSILYSPFPLLNFMDGNEVFFRIKRSTQLKKLMNAY 66
Query: 53 CERVNLEYETMQFLHDGQYVKGKRQTPKMLNLKNGDEIVAVRHQSGGG 100
C+R ++++ ++ FL DG+ ++ + QTP L +++GDEI A+ HQ+GGG
Sbjct: 67 CDRQSVDFNSIAFLFDGRRLRAE-QTPDELEMEDGDEIDAMLHQTGGG 113
>Glyma08g43290.2
Length = 86
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 GSSSQPSKRKAPTEEAGPADYVHFSIKGQDGRQLFFKVNKEAKLFNAFSSYCERVNLEYE 61
G ++ + K PTE+ +++ +KGQDG ++FF++ + +L ++YC+R ++++
Sbjct: 3 GVTNNNEEDKKPTEQGA---HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFN 59
Query: 62 TMQFLHDGQYVKGKRQTP 79
++ FL DG+ ++ + QTP
Sbjct: 60 SIAFLFDGRRLRAE-QTP 76