Miyakogusa Predicted Gene

Lj4g3v2593480.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2593480.3 CUFF.51232.3
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11550.3                                                        53   8e-08
Glyma08g11550.1                                                        53   8e-08
Glyma08g11550.2                                                        53   1e-07
Glyma05g28520.2                                                        51   4e-07
Glyma05g28520.1                                                        51   4e-07

>Glyma08g11550.3 
          Length = 565

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 88  TADDKGFSGQGGDHNVSS-IPKEIKQSGNKGILFENKLVKQYPGNNGE 134
           TADDKGF  Q    N      KEIKQ   KGILFEN+L KQY GNNGE
Sbjct: 93  TADDKGFPRQAEGLNAGKPHQKEIKQDNKKGILFENRLTKQYAGNNGE 140



 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGY KK  TDEVDLL
Sbjct: 1  MSRCFPFPPPGYGKKAITDEVDLL 24


>Glyma08g11550.1 
          Length = 565

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 88  TADDKGFSGQGGDHNVSS-IPKEIKQSGNKGILFENKLVKQYPGNNGE 134
           TADDKGF  Q    N      KEIKQ   KGILFEN+L KQY GNNGE
Sbjct: 93  TADDKGFPRQAEGLNAGKPHQKEIKQDNKKGILFENRLTKQYAGNNGE 140



 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGY KK  TDEVDLL
Sbjct: 1  MSRCFPFPPPGYGKKAITDEVDLL 24


>Glyma08g11550.2 
          Length = 404

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 88  TADDKGFSGQGGDHNVSS-IPKEIKQSGNKGILFENKLVKQYPGNNGE 134
           TADDKGF  Q    N      KEIKQ   KGILFEN+L KQY GNNGE
Sbjct: 93  TADDKGFPRQAEGLNAGKPHQKEIKQDNKKGILFENRLTKQYAGNNGE 140



 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGY KK  TDEVDLL
Sbjct: 1  MSRCFPFPPPGYGKKAITDEVDLL 24


>Glyma05g28520.2 
          Length = 561

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 89  ADDKGFSGQGGDHNVSS-IPKEIKQSGNKGILFENKLVKQYPGNNGE 134
           ADDKGF  Q    N      KEIKQ   KGILFEN+L KQY GNNGE
Sbjct: 94  ADDKGFPRQAEGLNAGKPHQKEIKQDDKKGILFENRLTKQYAGNNGE 140



 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGY KK  TDEVDLL
Sbjct: 1  MSRCFPFPPPGYGKKAITDEVDLL 24


>Glyma05g28520.1 
          Length = 561

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 89  ADDKGFSGQGGDHNVSS-IPKEIKQSGNKGILFENKLVKQYPGNNGE 134
           ADDKGF  Q    N      KEIKQ   KGILFEN+L KQY GNNGE
Sbjct: 94  ADDKGFPRQAEGLNAGKPHQKEIKQDDKKGILFENRLTKQYAGNNGE 140



 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGY KK  TDEVDLL
Sbjct: 1  MSRCFPFPPPGYGKKAITDEVDLL 24