Miyakogusa Predicted Gene

Lj4g3v2576090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2576090.1 tr|G7JBC0|G7JBC0_MEDTR Protein transport protein
Sec23 OS=Medicago truncatula GN=MTR_3g084740 PE=4
S,74.3,0,vWA-like,NULL; Zn-finger domain of Sec23/24,Zinc finger,
Sec23/Sec24-type; beta-sandwich domain of S,TC62100.path2.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00670.1                                                       315   2e-86
Glyma11g36760.1                                                       310   9e-85
Glyma03g22740.1                                                       241   4e-64
Glyma16g09230.1                                                       240   7e-64
Glyma18g00420.1                                                       118   4e-27
Glyma03g38830.1                                                        51   9e-07
Glyma03g38330.1                                                        51   9e-07
Glyma19g41400.2                                                        50   1e-06
Glyma19g41400.1                                                        50   1e-06
Glyma03g38830.2                                                        50   2e-06
Glyma19g40920.1                                                        50   2e-06
Glyma14g16120.1                                                        49   4e-06

>Glyma18g00670.1 
          Length = 766

 Score =  315 bits (807), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/212 (71%), Positives = 176/212 (83%), Gaps = 7/212 (3%)

Query: 1   MAHLA--DPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPL 58
           M+ +A  DPEG+DGVRMTWNVWP +KVE+SKCVIPLAAT+ +  PH    DIP +PY PL
Sbjct: 1   MSEMASPDPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHP---DIPRLPYAPL 57

Query: 59  RCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTI 118
           RCK+CSS LNPF  VDFTAKIWICPFC+ RN FPPHY  IS TNLP ELYPQYTT++Y +
Sbjct: 58  RCKTCSSALNPFSRVDFTAKIWICPFCYQRNHFPPHYHAISETNLPGELYPQYTTVEYIL 117

Query: 119 PNPNP-NPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHEL 177
           P  N  NP P VFLFLLDTC+I EE+ ++KSAL+RAIGLLPDNALVGF+SFGTQVQVHEL
Sbjct: 118 PLSNSLNPSP-VFLFLLDTCLIDEEIHFLKSALRRAIGLLPDNALVGFVSFGTQVQVHEL 176

Query: 178 AFSDMSKVYVFRGNKEITKDQVLEQLGLGGSG 209
            FSDMSKVYVFRG+KEI  +Q+L+QLGL  +G
Sbjct: 177 GFSDMSKVYVFRGSKEIPAEQILDQLGLSAAG 208


>Glyma11g36760.1 
          Length = 767

 Score =  310 bits (793), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 150/212 (70%), Positives = 174/212 (82%), Gaps = 7/212 (3%)

Query: 1   MAHLA--DPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPL 58
           M+ +A  DPEG+DGVRMTWNVWP +KVE+SKCVIPLAAT+ +  PH    DIP + Y PL
Sbjct: 1   MSEMASPDPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHP---DIPRLQYAPL 57

Query: 59  RCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTI 118
           RCK+CSS LNPF  VDFTAKIWICPFC+ RN FPPHY  IS TN P ELYPQYTT++Y +
Sbjct: 58  RCKTCSSALNPFSRVDFTAKIWICPFCYQRNHFPPHYHAISETNFPGELYPQYTTVEYLL 117

Query: 119 PNPNP-NPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHEL 177
           P  N  NP P VFLFLLDTC+I EE+ ++KSAL+RAIGLLPDNALVGF+SFGTQVQV+EL
Sbjct: 118 PLSNSLNPSP-VFLFLLDTCLIDEEIHFLKSALRRAIGLLPDNALVGFVSFGTQVQVYEL 176

Query: 178 AFSDMSKVYVFRGNKEITKDQVLEQLGLGGSG 209
            FSDMSKVYVFRG+KEI  +Q+L+QLGL  SG
Sbjct: 177 GFSDMSKVYVFRGSKEIPAEQILDQLGLSASG 208


>Glyma03g22740.1 
          Length = 767

 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 115/210 (54%), Positives = 151/210 (71%), Gaps = 8/210 (3%)

Query: 1   MAHLADPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRC 60
           MA   D E  DGVRM WNV PG+K +A   V+P++A   V  P  +   +P + Y+PLRC
Sbjct: 1   MAEFLDLESQDGVRMPWNVIPGTKQDAQNAVVPISA---VYTPIKHFPSMPVLNYSPLRC 57

Query: 61  KSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTI-- 118
           ++C S+LNPFCIVDF AKIWICPFCF RN FPPHY+ IS  +LPAEL+PQYTT++Y    
Sbjct: 58  RTCRSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYSSISDDSLPAELFPQYTTVEYNSDA 117

Query: 119 ---PNPNPNPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVH 175
              P  N    P VFLF++DTC+I EE+ +++SAL +A+ LLP+N+LVG I+FGT V VH
Sbjct: 118 AVGPTYNNPSVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPENSLVGLITFGTFVHVH 177

Query: 176 ELAFSDMSKVYVFRGNKEITKDQVLEQLGL 205
           EL F  + K YVF+G+K++TKDQ+LEQ+  
Sbjct: 178 ELGFGAVPKTYVFKGSKDLTKDQLLEQMSF 207


>Glyma16g09230.1 
          Length = 516

 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 113/208 (54%), Positives = 148/208 (71%), Gaps = 6/208 (2%)

Query: 1   MAHLADPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRC 60
           MA   D E  DGVRM WNV PG+K +A   V+P++A   V  P  +   +P + Y+PLRC
Sbjct: 1   MAEFLDLESQDGVRMPWNVIPGTKQDAQNAVVPVSA---VYTPIKHFTSMPLLNYSPLRC 57

Query: 61  KSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTIPN 120
           ++C S+LNPFCIVDF AKIWICPFCF RN FPPHYA IS  +LPAEL+PQYTT++Y    
Sbjct: 58  RTCRSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYASISDDSLPAELFPQYTTVEYNSDA 117

Query: 121 PNPNPQPH---VFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHEL 177
             P   P    VFLF++DTC+I EE+ +++SAL +A+ LLP+N+LVG I+FG    VHEL
Sbjct: 118 VGPTNTPSVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPENSLVGLITFGMFAHVHEL 177

Query: 178 AFSDMSKVYVFRGNKEITKDQVLEQLGL 205
            F  + K YVF+G+K++TKDQ+LEQ+  
Sbjct: 178 GFGAVPKTYVFKGSKDVTKDQLLEQMSF 205


>Glyma18g00420.1 
          Length = 730

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 120/196 (61%), Gaps = 8/196 (4%)

Query: 4   LADPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRCKSC 63
           L + E ++G+R  WN W     + +  +IPL  +I  T     + ++P +PY PL C  C
Sbjct: 3   LVELEAVEGLRWAWNSWAA---DGTNMIIPL--SIMCTPLMLLNSEVPLLPYDPLLCSRC 57

Query: 64  SSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTIPNPNP 123
            ++LNP+  +D+ ++IW CPFC  RN FP     I+ TNLPAEL+P Y+T++Y+ P+P+P
Sbjct: 58  GAVLNPYARLDYQSRIWHCPFCSLRNPFP---RPIADTNLPAELFPTYSTVEYSSPSPSP 114

Query: 124 NPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHELAFSDMS 183
            P P  F+FLLD     +E+  +K+ L   +  LPD++LV  I+F + V +H L+ S  S
Sbjct: 115 PPPPPAFVFLLDLSTPQDELPPLKNQLLHLLHHLPDHSLVSLITFDSMVYLHHLSSSHFS 174

Query: 184 KVYVFRGNKEITKDQV 199
            + VF GN+ ++ +Q+
Sbjct: 175 SLLVFHGNRHLSSNQI 190


>Glyma03g38830.1 
          Length = 1028

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATI-PVTIPHHYHHDIPTVPYTP---LRCKSCSSLLN 68
           +R+T +  P S+  AS+  +PL A + P+  P     ++P V + P   +RC+ C + +N
Sbjct: 311 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPD-GEEVPIVNFAPASVVRCRRCRTYVN 369

Query: 69  PFCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP-- 121
           P+       + + C  C   N  P  +YAQ+  T    ++   P+ T  T+++  P    
Sbjct: 370 PYMTFTEAGRKFRCNICTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYM 429

Query: 122 -NPNPQPHVFLFLLDTCIIPEE---MDYVKSALQRAIGLLPD--NALVGFISFGTQVQVH 175
             P P P V+ FL+D  I       ++ V + ++  +  LP      +GF +F + +  +
Sbjct: 430 VRP-PMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFY 488

Query: 176 ELAFS 180
            +  S
Sbjct: 489 NMKSS 493


>Glyma03g38330.1 
          Length = 871

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)

Query: 57  PLRCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNL---PAELYPQYTT 113
           P RC+SC +  N +C +   +  W C  C   N     Y   S  +L   P    P +  
Sbjct: 192 PHRCQSCGAYANIYCNILLGSGQWQCVICRKLNGSEGEYIAHSKEDLHRFPELSSPMFDY 251

Query: 114 LQYTIPNPNPNPQPHV-----FLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISF 168
           +Q     P   P          + ++D C+    + +++S+L   +  LP    +G I +
Sbjct: 252 VQTGNKRPGFVPVSDSRMSAPIVLVIDECLDEPHLHHLQSSLHAFVDSLPPTTRLGIILY 311

Query: 169 GTQVQVHELAFSDMSKVYVFRGNKEITKDQV 199
           G  V V++L+   M+   V  G+K  +++ +
Sbjct: 312 GRTVSVYDLSEEAMASADVLPGDKSPSQESL 342


>Glyma19g41400.2 
          Length = 1026

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATI-PVTIPHHYHHDIPTVPYTP---LRCKSCSSLLN 68
           +R+T +  P S+  AS+  +PL A + P+  P     ++P V + P   +RC+ C + +N
Sbjct: 309 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPD-GEEVPIVNFAPASVVRCRRCRTYVN 367

Query: 69  PFCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP-- 121
           P+       + + C  C   N  P  +YAQ+  T    ++   P+ T  T+++  P    
Sbjct: 368 PYMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYM 427

Query: 122 -NPNPQPHVFLFLLDTCIIPEE---MDYVKSALQRAIGLLPD--NALVGFISFGTQVQVH 175
             P P P V+ FL+D  I       ++ V + ++  +  LP      +GF +F + +  +
Sbjct: 428 VRP-PMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFY 486

Query: 176 ELAFS 180
            +  S
Sbjct: 487 NMKSS 491


>Glyma19g41400.1 
          Length = 1026

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATI-PVTIPHHYHHDIPTVPYTP---LRCKSCSSLLN 68
           +R+T +  P S+  AS+  +PL A + P+  P     ++P V + P   +RC+ C + +N
Sbjct: 309 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPD-GEEVPIVNFAPASVVRCRRCRTYVN 367

Query: 69  PFCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP-- 121
           P+       + + C  C   N  P  +YAQ+  T    ++   P+ T  T+++  P    
Sbjct: 368 PYMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYM 427

Query: 122 -NPNPQPHVFLFLLDTCIIPEE---MDYVKSALQRAIGLLPD--NALVGFISFGTQVQVH 175
             P P P V+ FL+D  I       ++ V + ++  +  LP      +GF +F + +  +
Sbjct: 428 VRP-PMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFY 486

Query: 176 ELAFS 180
            +  S
Sbjct: 487 NMKSS 491


>Glyma03g38830.2 
          Length = 903

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATI-PVTIPHHYHHDIPTVPYTP---LRCKSCSSLLN 68
           +R+T +  P S+  AS+  +PL A + P+  P     ++P V + P   +RC+ C + +N
Sbjct: 311 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPD-GEEVPIVNFAPASVVRCRRCRTYVN 369

Query: 69  PFCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP-- 121
           P+       + + C  C   N  P  +YAQ+  T    ++   P+ T  T+++  P    
Sbjct: 370 PYMTFTEAGRKFRCNICTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYM 429

Query: 122 -NPNPQPHVFLFLLDTCIIPEE---MDYVKSALQRAIGLLPD--NALVGFISFGTQVQVH 175
             P P P V+ FL+D  I       ++ V + ++  +  LP      +GF +F + +  +
Sbjct: 430 VRP-PMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFY 488

Query: 176 ELAFS 180
            +  S
Sbjct: 489 NMKSS 493


>Glyma19g40920.1 
          Length = 871

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)

Query: 57  PLRCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNL---PAELYPQYTT 113
           P RC+SC +  N +C +   +  W C  C   N     Y   S  +L   P    P +  
Sbjct: 192 PHRCQSCGAYANIYCNILLGSGQWQCVICRKLNGSEGEYIAHSKEDLHRFPELSSPMFDY 251

Query: 114 LQYTIPNPNPNPQPHV-----FLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISF 168
           +Q     P   P          + ++D C+    + +++S+L   +  LP    +G I +
Sbjct: 252 VQTGNKRPGFVPVSDSRMSAPIVLVIDECLDEPHLHHLQSSLHAFVDSLPPITRLGIILY 311

Query: 169 GTQVQVHELAFSDMSKVYVFRGNKEITKDQV 199
           G  V V++L+   M+   V  G+K  +++ +
Sbjct: 312 GRTVSVYDLSEEAMASADVLPGDKSPSQESL 342


>Glyma14g16120.1 
          Length = 126

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 11/50 (22%)

Query: 160 NALVGFISFGTQVQVHELAFSDMSKVYVFRGNKEITKDQVLEQLGLGGSG 209
           NALVGF+SF  QVQV           YVFR +KEI  +Q+L+QLGL  SG
Sbjct: 1   NALVGFVSFEAQVQV-----------YVFRDSKEIPVEQILDQLGLSASG 39