Miyakogusa Predicted Gene

Lj4g3v2573620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2573620.1 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2
SV=,46.9,0.000000000000006,seg,NULL,CUFF.51128.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g28120.1                                                       152   8e-38
Glyma05g28120.2                                                       141   2e-34
Glyma18g00820.1                                                       134   2e-32
Glyma11g36900.2                                                       132   1e-31
Glyma11g36900.1                                                       124   2e-29
Glyma11g36900.3                                                       121   2e-28

>Glyma05g28120.1 
          Length = 116

 Score =  152 bits (385), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 95/124 (76%), Gaps = 18/124 (14%)

Query: 12  NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALL 71
            SRVFCELSALVFNLLRS P+         IVP      P ARRS    QITPAGFA+LL
Sbjct: 8   QSRVFCELSALVFNLLRS-PS---------IVP-----EPPARRSPAGAQITPAGFASLL 52

Query: 72  LGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFPE 128
           LGISV+LMLCGSVTFF+GFMLMPWV+GLVMV YVAGVV+SLSV+GRSI     PRKD PE
Sbjct: 53  LGISVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILCYATPRKDLPE 112

Query: 129 WKLI 132
           WKLI
Sbjct: 113 WKLI 116


>Glyma05g28120.2 
          Length = 112

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 90/119 (75%), Gaps = 18/119 (15%)

Query: 12  NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALL 71
            SRVFCELSALVFNLLRS P+         IVP      P ARRS    QITPAGFA+LL
Sbjct: 8   QSRVFCELSALVFNLLRS-PS---------IVP-----EPPARRSPAGAQITPAGFASLL 52

Query: 72  LGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFP 127
           LGISV+LMLCGSVTFF+GFMLMPWV+GLVMV YVAGVV+SLSV+GRSI     PRKD P
Sbjct: 53  LGISVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILCYATPRKDLP 111


>Glyma18g00820.1 
          Length = 177

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/139 (53%), Positives = 93/139 (66%), Gaps = 20/139 (14%)

Query: 1   MMRGXXXXXXXNSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAG 60
           MMRG        SR   +LS+LV NLLRS   P++F D  P    RP ++          
Sbjct: 52  MMRGRRRHQDEQSRALYDLSSLVLNLLRS---PLTFSDEVPPASRRPGQA---------- 98

Query: 61  QITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF 120
           QI+PAGFA+LLLGIS++LMLCGSVTFF+GF+LMPWV+GLVM+ YVAG++++LSV GRSI 
Sbjct: 99  QISPAGFASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSTLSVFGRSIL 158

Query: 121 -------YPRKDFPEWKLI 132
                   PRKD P WKL+
Sbjct: 159 CYATSPPSPRKDIPAWKLM 177


>Glyma11g36900.2 
          Length = 132

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 94/140 (67%), Gaps = 16/140 (11%)

Query: 1   MMRGXX-XXXXXNSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTA 59
           MMRG         SR   +LSALV NLLRS  + ++F D  P  P+  S  P        
Sbjct: 1   MMRGRTRHEEDEQSRALYQLSALVLNLLRSPLSSLTFSDEVP--PLAASRRP------GL 52

Query: 60  GQITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSI 119
           GQI+PAGFA+LLLGIS++LMLCGSVTFF+GF+LMPWV+GLVM+ YVAG+++SLSV GRSI
Sbjct: 53  GQISPAGFASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSSLSVFGRSI 112

Query: 120 F-------YPRKDFPEWKLI 132
                    PRKD P WKL+
Sbjct: 113 LCYATAPPSPRKDIPAWKLM 132


>Glyma11g36900.1 
          Length = 138

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 90/135 (66%), Gaps = 16/135 (11%)

Query: 1   MMRGXX-XXXXXNSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTA 59
           MMRG         SR   +LSALV NLLRS  + ++F D  P  P+  S  P        
Sbjct: 1   MMRGRTRHEEDEQSRALYQLSALVLNLLRSPLSSLTFSDEVP--PLAASRRP------GL 52

Query: 60  GQITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSI 119
           GQI+PAGFA+LLLGIS++LMLCGSVTFF+GF+LMPWV+GLVM+ YVAG+++SLSV GRSI
Sbjct: 53  GQISPAGFASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSSLSVFGRSI 112

Query: 120 F-------YPRKDFP 127
                    PRKD P
Sbjct: 113 LCYATAPPSPRKDIP 127


>Glyma11g36900.3 
          Length = 127

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/135 (54%), Positives = 91/135 (67%), Gaps = 11/135 (8%)

Query: 1   MMRGXX-XXXXXNSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTA 59
           MMRG         SR   +LSALV NLLRS  + ++F D  P  P+  S  P        
Sbjct: 1   MMRGRTRHEEDEQSRALYQLSALVLNLLRSPLSSLTFSDEVP--PLAASRRP------GL 52

Query: 60  GQITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSI 119
           GQI+PAGFA+LLLGIS++LMLCGSVTFF+GF+LMPWV+GLVM+ YVAG+++SLSV GRSI
Sbjct: 53  GQISPAGFASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSSLSVFGRSI 112

Query: 120 --FYPRKDFPEWKLI 132
             +      P WKL+
Sbjct: 113 LCYATAPPSPPWKLM 127