Miyakogusa Predicted Gene
- Lj4g3v2526060.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2526060.2 Non Chatacterized Hit- tr|I1R7U0|I1R7U0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,31.86,3e-18,Remorin_C,Remorin, C-terminal; seg,NULL;
coiled-coil,NULL; FAMILY NOT NAMED,NULL,CUFF.51093.2
(348 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g27810.1 377 e-105
Glyma08g10800.1 364 e-100
Glyma05g27810.2 265 5e-71
Glyma08g10530.1 94 2e-19
Glyma05g27550.1 89 6e-18
Glyma08g24920.1 84 3e-16
Glyma08g09610.1 74 2e-13
Glyma19g32280.1 58 1e-08
Glyma02g31460.1 55 1e-07
Glyma10g21570.1 55 2e-07
Glyma16g01620.1 50 3e-06
Glyma07g05120.1 50 5e-06
>Glyma05g27810.1
Length = 367
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/386 (57%), Positives = 245/386 (63%), Gaps = 57/386 (14%)
Query: 1 MKYVEDK----------EISNSSAVMHHSEFQNGKNAARVSNHRHRITNGKPTPSKWDDA 50
M+YVEDK E NSSA+ +SEF GK+A RVSNH HR T GKPTPSKWDDA
Sbjct: 1 MRYVEDKGCYNNNGPTQETPNSSAM--YSEFHKGKDATRVSNHHHRATMGKPTPSKWDDA 58
Query: 51 QKWLVGLXXXXXXXXXXXXXXXXPRNSNADDLRLIAPVPQKEQDYSSSEKEEEDQEHDVC 110
QKWLVGL PRNSNADDLRLIAPVPQKE DYSSSEKEE +E+D C
Sbjct: 59 QKWLVGLSKGGEKSHSKSK----PRNSNADDLRLIAPVPQKEHDYSSSEKEE--EENDAC 112
Query: 111 HDFITTTTSDDAETNKYVSEH-----------------------TLVPVQSLCFRDMGTE 147
HDF+T S +A +Y +E + VQ +CFRDMGTE
Sbjct: 113 HDFMTNIISANAIAAQYEAEAKRVECDESNWGSNNNNNDNRFSGNTIQVQPICFRDMGTE 172
Query: 148 MTPIASQEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNGLDNKGAAEGGSVSSRGNNGT 207
MTPI SQE IHSGTSTPM+GQNGL AEGG ++R
Sbjct: 173 MTPITSQEPSRTGTPIRATTPATRSPIHSGTSTPMRGQNGLQQ--VAEGGHGTTRK---- 226
Query: 208 ITRQCCGGEGS----EKKIED-QAKKLSPLESRAIAWDEAERAKFMARFKREEVKIQAWE 262
CG +GS +K ED QA+KLSPLESRA+AWDEAERAKFMARFKREEVKIQAWE
Sbjct: 227 -----CGDQGSTSPCKKTHEDHQARKLSPLESRAMAWDEAERAKFMARFKREEVKIQAWE 281
Query: 263 NHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKLATTKRIAEEKRANAQVELKDQALKTTE 322
NHQI LAQERF NKLA+TKRIAEEKRANAQV+L D+AL+TTE
Sbjct: 282 NHQIRKAEMEMKKMEVKAERMKALAQERFANKLASTKRIAEEKRANAQVKLNDKALRTTE 341
Query: 323 RVEYIRRTGHVPSSFSFNFKLPSICW 348
RVEYIRRTGHVPSSFSF+FKLPSICW
Sbjct: 342 RVEYIRRTGHVPSSFSFSFKLPSICW 367
>Glyma08g10800.1
Length = 367
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/388 (55%), Positives = 243/388 (62%), Gaps = 61/388 (15%)
Query: 1 MKYVEDK----------EISNSSAVMHHSEFQNGKNAARVSNHRHRITNGKPTPSKWDDA 50
M+YVEDK E NSSA+ +SEF GK+A VSNH HR T GKPTPSKWDDA
Sbjct: 1 MRYVEDKGCYNNNGPTQETPNSSAM--YSEFHKGKDATSVSNHHHRATMGKPTPSKWDDA 58
Query: 51 QKWLVGLXXXXXXXXXXXXXXXXPRNSNADDLRLIAPVPQKEQDYSSSEKEEEDQEHDVC 110
QKWLVGL PRNSNADDLRLIAPVPQKE DYSSSEKEE +E+D C
Sbjct: 59 QKWLVGLSKGGGEKSHSKSK---PRNSNADDLRLIAPVPQKENDYSSSEKEE--EENDAC 113
Query: 111 HDFITTTT--SDDAETNKYVSE-----------------------HTLVPVQSLCFRDMG 145
HDFI T S +A +Y +E + + VQ +CFRDMG
Sbjct: 114 HDFIMTNNIISANATAAQYEAEAKRVECDESNWRSNNNNNKRSSENYTIQVQPICFRDMG 173
Query: 146 TEMTPIASQEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNGLDNKGAAEGGSVSSRGNN 205
TEMTPIASQE IHSG STPM+GQNG ++ AE
Sbjct: 174 TEMTPIASQEPSRTGTPIRATTPATRSPIHSGASTPMRGQNG--SQHVAE---------- 221
Query: 206 GTITRQCCGGEGS----EKKIED-QAKKLSPLESRAIAWDEAERAKFMARFKREEVKIQA 260
TR+C GEGS ++ ED QA+KLSPLESRA+AWDEAERAK+MARFKREEVKIQA
Sbjct: 222 --TTRKCGNGEGSTSPCKRTHEDHQARKLSPLESRAMAWDEAERAKYMARFKREEVKIQA 279
Query: 261 WENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKLATTKRIAEEKRANAQVELKDQALKT 320
WENHQI LAQERFTNKLA+TKRIAEEKRANAQV+L D+AL+
Sbjct: 280 WENHQIRKAEMEMKKMEVKAERMKALAQERFTNKLASTKRIAEEKRANAQVKLNDKALRA 339
Query: 321 TERVEYIRRTGHVPSSFSFNFKLPSICW 348
TERVEYIRRTGHVPSSFS +FKLPSICW
Sbjct: 340 TERVEYIRRTGHVPSSFSLSFKLPSICW 367
>Glyma05g27810.2
Length = 314
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/304 (54%), Positives = 184/304 (60%), Gaps = 57/304 (18%)
Query: 1 MKYVEDK----------EISNSSAVMHHSEFQNGKNAARVSNHRHRITNGKPTPSKWDDA 50
M+YVEDK E NSSA+ +SEF GK+A RVSNH HR T GKPTPSKWDDA
Sbjct: 1 MRYVEDKGCYNNNGPTQETPNSSAM--YSEFHKGKDATRVSNHHHRATMGKPTPSKWDDA 58
Query: 51 QKWLVGLXXXXXXXXXXXXXXXXPRNSNADDLRLIAPVPQKEQDYSSSEKEEEDQEHDVC 110
QKWLVGL PRNSNADDLRLIAPVPQKE DYSSSEKEE +E+D C
Sbjct: 59 QKWLVGLSKGGEKSHSKSK----PRNSNADDLRLIAPVPQKEHDYSSSEKEE--EENDAC 112
Query: 111 HDFITTTTSDDAETNKYVSEH-----------------------TLVPVQSLCFRDMGTE 147
HDF+T S +A +Y +E + VQ +CFRDMGTE
Sbjct: 113 HDFMTNIISANAIAAQYEAEAKRVECDESNWGSNNNNNDNRFSGNTIQVQPICFRDMGTE 172
Query: 148 MTPIASQEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNGLDNKGAAEGGSVSSRGNNGT 207
MTPI SQE IHSGTSTPM+GQNGL AEGG ++R
Sbjct: 173 MTPITSQEPSRTGTPIRATTPATRSPIHSGTSTPMRGQNGLQQ--VAEGGHGTTRK---- 226
Query: 208 ITRQCCGGEGS----EKKIED-QAKKLSPLESRAIAWDEAERAKFMARFKREEVKIQAWE 262
CG +GS +K ED QA+KLSPLESRA+AWDEAERAKFMARFKREEVKIQAWE
Sbjct: 227 -----CGDQGSTSPCKKTHEDHQARKLSPLESRAMAWDEAERAKFMARFKREEVKIQAWE 281
Query: 263 NHQI 266
NHQI
Sbjct: 282 NHQI 285
>Glyma08g10530.1
Length = 515
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 155/395 (39%), Gaps = 64/395 (16%)
Query: 1 MKYVEDKEIS-NSSAVMHHSEFQNGKNAARVSNHRHRITNGKPTPSKWDDAQKWLVGLXX 59
++ +ED+ + +S+A EF G+ R N+ + +P PSKW+DA+KW++
Sbjct: 118 VRAIEDENLDYDSNASSSSFEFDKGE---RPGNNPATRSLFRPIPSKWNDAEKWIMNRQN 174
Query: 60 XXXXXXXXXXXXXXPRNSNADDLRLIAPVPQKEQDYSSSEKEEEDQEHDVCH-------- 111
N ++ +AP K E + D+C
Sbjct: 175 IQANHSKKNTAHNQA-NRMPTNMGRVAPESGNYDHKLPIGKATETKRVDICQPTSHMGFE 233
Query: 112 --DFITT---TTSDDAETN-------------KYVSEHTLVPVQSLCFRDMGTEMTPIAS 153
F+ + + S A K V+E + ++S+ RDMGTEMTP+ S
Sbjct: 234 KFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKDVNELVMPGIRSVAMRDMGTEMTPVPS 293
Query: 154 QEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNG---LDN------KGAAEGGSVSSRGN 204
QE + S STP +G LDN + E G
Sbjct: 294 QEPSRTATPVGSATPLRSP-VSSMPSTPRRGAPAPTPLDNTTNEDSQFPVENGKRHLSEE 352
Query: 205 NGTI-TRQCCGGEGSE----------KKIEDQAKKLSP------------LESRAIAWDE 241
I TR+ G + K E + K SP E RA W+E
Sbjct: 353 EMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPRDMSVQEQERIEFEKRAALWEE 412
Query: 242 AERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKLATTKRI 301
AE++K ARFKREE+KIQAWE+ Q + K+A ++
Sbjct: 413 AEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMRAQTHAKMVKKIAMARQR 472
Query: 302 AEEKRANAQVELKDQALKTTERVEYIRRTGHVPSS 336
+EEKRA A+ +A +T + EYIR+TG +PSS
Sbjct: 473 SEEKRAAAEARKNREAERTVAQTEYIRQTGRLPSS 507
>Glyma05g27550.1
Length = 540
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 136 VQSLCFRDMGTEMTPIASQEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNG---LDN-- 190
++S+ RDMGTEMTP+ SQE + S STP +G LDN
Sbjct: 301 IRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLRSP-VSSMPSTPRRGAPAPTPLDNTT 359
Query: 191 ----KGAAEGGSVSSRGNNGTI-TRQCCGGEGSE----------KKIEDQAKKLSP---- 231
+ E G + I TR+ G + K E + K SP
Sbjct: 360 DEDSQFPVENGKRNLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPQEAN 419
Query: 232 --------LESRAIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXX 283
E RA W+EAE++K ARFKREE+KIQAWE+ Q
Sbjct: 420 VNEQERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQM 479
Query: 284 XXLAQERFTNKLATTKRIAEEKRANAQVELKDQALKTTERVEYIRRTGHVPSS 336
+ K+A ++ +EEKRA A+ +A +T + EYIR+TG +PSS
Sbjct: 480 RAQTHAKMVKKIAMARQRSEEKRAAAEARKNREAERTAAQTEYIRQTGRLPSS 532
>Glyma08g24920.1
Length = 564
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 102/240 (42%), Gaps = 34/240 (14%)
Query: 130 EHTLVP-VQSLCFRDMGTEMTPIASQEXXXXXXXXXXXXXXXXXXIHSGTSTPMKGQNG- 187
+ +++P ++S+ RDMGTEMTP+ SQE + S STP +G
Sbjct: 305 DQSVMPGIRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLRSP-VSSMPSTPRRGAPAP 363
Query: 188 --LDN------KGAAEGGSVSSRGNNGTI-TRQCCGGEGSE----------KKIEDQAKK 228
LDN + E G I TR+ G + K E + K
Sbjct: 364 TPLDNTTNEDSQFPVENGKRHLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNK 423
Query: 229 LSP------------LESRAIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXX 276
SP E RA W+EAE++K ARFKREE+KIQAWE+ Q
Sbjct: 424 SSPRDVSVLEQERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMGRI 483
Query: 277 XXXXXXXXXLAQERFTNKLATTKRIAEEKRANAQVELKDQALKTTERVEYIRRTGHVPSS 336
+ K+A ++ EEK A A+ +A +T + EYIR+TG +PSS
Sbjct: 484 EAKVEQMRAQTHAKMVKKIAMARQRLEEKCAAAEARKNREAERTAAQTEYIRQTGRLPSS 543
>Glyma08g09610.1
Length = 602
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 54/91 (59%)
Query: 247 FMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKLATTKRIAEEKR 306
+MARF+REE+KIQAWENHQ A ++ NKLA + AEEKR
Sbjct: 492 YMARFRREEMKIQAWENHQKAKTEAKMKKIEVEVERIRGKAHDKLMNKLAAARHKAEEKR 551
Query: 307 ANAQVELKDQALKTTERVEYIRRTGHVPSSF 337
A A+ QA KT E+ EYIRRTGHVPSS+
Sbjct: 552 AAAEANRNHQAAKTEEQAEYIRRTGHVPSSY 582
>Glyma19g32280.1
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 198 SVSSRGNNGTITRQCCGGEGSEKKIEDQAKKLSPLESRAIAWDEAERAKFMARFKREEVK 257
S SS+G G GG E+ + Q K ++++ AW A+ AK RFKRE+
Sbjct: 136 SSSSQGVRG-------GGAAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAV 188
Query: 258 IQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKLATTKRIAEEKRANAQVELKDQA 317
I WE+ Q+ A E+ N +A R AEE+RA+A+ + +
Sbjct: 189 INGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKV 248
Query: 318 LKTTERVEYIRRTGHVPSSFSF 339
+ E +R G P+ SF
Sbjct: 249 ARVLEIASLMRAVGRPPAKKSF 270
>Glyma02g31460.1
Length = 231
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%)
Query: 232 LESRAIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERF 291
+E++ AW A+ AK RFKRE+ I WEN Q+ A E+
Sbjct: 123 VEAKISAWQNAKVAKINNRFKREDAVINGWENEQVQKASSWMKKVERKLEEKRARALEKM 182
Query: 292 TNKLATTKRIAEEKRANAQVELKDQALKTTERVEYIRRTGHVPSSFSF 339
N +A R AEE+RA+A+ + + + E +R G P+ SF
Sbjct: 183 QNDVAKAHRKAEERRASAEAKRGTKVARVLEIANLMRAVGRAPTKRSF 230
>Glyma10g21570.1
Length = 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 232 LESRAIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERF 291
+E++ AW A+ AK RFKRE+ I WEN Q+ A E+
Sbjct: 188 VEAKISAWQNAKVAKINNRFKREDAVINGWENEQVQKASSWMKKVERKLEEKRARALEKM 247
Query: 292 TNKLATTKRIAEEKRANAQVELKDQALKTTERVEYIRRTGHVPSSFSF 339
N +A R AEE++A+A+ + + + E +R G P+ SF
Sbjct: 248 QNDVAKAHRKAEERKASAEAKRGTKVARVLEIANLMRAVGRAPTKRSF 295
>Glyma16g01620.1
Length = 394
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%)
Query: 236 AIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKL 295
A AW+E E+ K R++REE KIQAW N Q +E+ ++
Sbjct: 279 AAAWEEEEKTKCCLRYQREEAKIQAWVNLQNAKAEARSRKLEVKIQKMKSSLEEKLMKRM 338
Query: 296 ATTKRIAEEKRANAQVELKDQALKTTERVEYI 327
+ R AEE RA A+ + DQ K T + + I
Sbjct: 339 SVVHRKAEEWRAEARQQHLDQIQKATVQAQKI 370
>Glyma07g05120.1
Length = 372
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 236 AIAWDEAERAKFMARFKREEVKIQAWENHQIXXXXXXXXXXXXXXXXXXXLAQERFTNKL 295
A AW+E E+ K R++REE KIQAW N Q +E+ ++
Sbjct: 257 AAAWEEEEKTKCCLRYQREEAKIQAWVNLQNAKAEARSRKLEVKIQKMKSSLEEKLMKRM 316
Query: 296 ATTKRIAEEKRANAQVELKDQALKTTERVEYI 327
+ R AEE RA A+ + +Q K TE+ + +
Sbjct: 317 SVVHRKAEEWRAEARQQHLEQIHKATEQAQKM 348