Miyakogusa Predicted Gene
- Lj4g3v2513900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2513900.1 Non Chatacterized Hit- tr|I1K3J0|I1K3J0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20253 PE,84.77,0,SIGNAL
RECOGNITION PARTICLE 72,NULL; SIGNAL RECOGNITION PARTICLE 72,Signal
recognition particle, SRP,CUFF.51088.1
(662 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g27690.1 955 0.0
>Glyma05g27690.1
Length = 662
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/633 (77%), Positives = 534/633 (84%), Gaps = 2/633 (0%)
Query: 18 LEDLFTTLSRHIQSSAFDHAAKVADQILAVAPGDEDAIRCKVVALIKVDRVEDALSAIHS 77
LEDLFTTL+RHIQ+SA+D+A ++ DQILA+APGDEDA+RCKVVALIK DRVED LSAI S
Sbjct: 18 LEDLFTTLNRHIQASAYDNAVRLTDQILAIAPGDEDALRCKVVALIKNDRVEDTLSAIRS 77
Query: 78 SKTLPDDFHYLKAYCLYRQNKLDEALESLRKQERDDETMLLESQILYRLGKMDACLDIYQ 137
SK DDFH+LKAYCLYRQNKLDEALESL++QE +DETMLLE QILYRLGKMDACLDIY+
Sbjct: 78 SKKQLDDFHFLKAYCLYRQNKLDEALESLKRQESNDETMLLECQILYRLGKMDACLDIYR 137
Query: 138 KLQKSKIDSLEINSVAAFVMAGRSSDVQGLLDSLRLKATSSFELAYNTACSLIERKKYTD 197
KLQ SKID++EINSVAA VM+GRSS+VQG+LDSLR+KATSSFELAYNTACSLI R +YTD
Sbjct: 138 KLQNSKIDNMEINSVAALVMSGRSSEVQGMLDSLRVKATSSFELAYNTACSLIARNEYTD 197
Query: 198 AEQLLLSGRRIGQEVLMEDNLPDDEIEIELSPLAVQLAYVRQLLGNKQDAIEAYTDVIKR 257
AEQLLLSGRRIGQEVLMEDNL DDEIEIELSP+AVQLAYV+QLLG KQDAIEAYTDVIKR
Sbjct: 198 AEQLLLSGRRIGQEVLMEDNLADDEIEIELSPIAVQLAYVQQLLGRKQDAIEAYTDVIKR 257
Query: 258 DMADESSIAVAINNLVSLRGAKDVSDSLRKLDRLKEKDAQNFRLAHGLDLKLSSKERETI 317
DMADESSIAVA+NNLVSL+G KDVSDSLRKLDRLK+K+ Q+FRLA GLDLKLS+KE+E I
Sbjct: 258 DMADESSIAVAVNNLVSLKGPKDVSDSLRKLDRLKDKENQSFRLAPGLDLKLSAKEKEAI 317
Query: 318 YANRILLLLHANKLDQARELVSALPDMFPDSVIPVLLQAALLVRENKAGRAEEILAQFAG 377
YANR+LLLLHANK +QARELVSALPDMFP+SVIP+ LQAALLVRENKAGRAEEILAQFA
Sbjct: 318 YANRVLLLLHANKNEQARELVSALPDMFPESVIPIFLQAALLVRENKAGRAEEILAQFAS 377
Query: 378 KFPEKSKXXXXXXXXXXXXXXXXXXXXDSLAKISDIQHMPATVATMVSLKERAGDIEGAA 437
KFP+KSK DSL KISDIQHMPATVAT+VSLKERAGDI+GAA
Sbjct: 378 KFPDKSKVVHLARAQVAAAAGHPHIAADSLTKISDIQHMPATVATLVSLKERAGDIDGAA 437
Query: 438 SVLDAATQWWSNAMTEDNKLNVIMQEAASFKLRHGKEEGAAKLYEGLVKSQGSIEALVGL 497
+VLD AT+WWSNAMTEDNKLN I QEAA FKLRHGKEE AA+LYE LVKSQGSIEALVGL
Sbjct: 438 AVLDNATKWWSNAMTEDNKLNTITQEAALFKLRHGKEEEAAQLYEQLVKSQGSIEALVGL 497
Query: 498 ITTVARADVVKAELYEKQLKTLAGSKGIDVDSLERTSGVKQVAGP-VDVTETYEEGXXXX 556
+TTVAR DV KAELYEKQL L G KGIDVDSLERTSGVKQV P V V ETYEEG
Sbjct: 498 VTTVARMDVAKAELYEKQLNALPGLKGIDVDSLERTSGVKQVDAPRVGVAETYEEGKNKT 557
Query: 557 XXXXXXXXXXXXXXXXXXXXXXXXXXXERWLPKRERSTFRPKRKDKRAAQVRGSQGAVAK 616
ERWLPKRERST+RPKRKDKRAAQVRGSQGAV +
Sbjct: 558 KSKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVR 617
Query: 617 EKHDAGSSSNHSNPKSNQSTSSKGVAQNAVSEQ 649
+KHD G+SSN SN KSNQ T SKG AQNAVSEQ
Sbjct: 618 DKHDTGASSNSSNLKSNQGT-SKGAAQNAVSEQ 649