Miyakogusa Predicted Gene

Lj4g3v2422680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2422680.1 tr|E1Z533|E1Z533_CHLVA Expressed protein
OS=Chlorella variabilis GN=CHLNCDRAFT_138026 PE=4
SV=1,40,0.00000000009,no description,NULL; seg,NULL; MRP-S28,Ribosomal
protein S24/S35, mitochondrial, conserved domain; M,CUFF.51012.1
         (410 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g27040.1                                                       622   e-178
Glyma08g10020.3                                                       612   e-175
Glyma08g10020.1                                                       612   e-175
Glyma08g10020.2                                                       557   e-159
Glyma11g12010.1                                                        78   2e-14
Glyma20g31240.1                                                        65   1e-10
Glyma17g21580.1                                                        53   6e-07
Glyma09g31180.1                                                        49   8e-06

>Glyma05g27040.1 
          Length = 390

 Score =  622 bits (1605), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 315/410 (76%), Positives = 340/410 (82%), Gaps = 20/410 (4%)

Query: 1   MRRTLLRNASLLYTRNXXXXXXXXXXXXXXXXXXXXXXXXXXNRFRPRLFSSDETPKSPV 60
           MRRTLLRNA+L YTRN                           R + RLF S+ETP  PV
Sbjct: 1   MRRTLLRNATL-YTRNLLHQSAPAFDAS--------------TRPQLRLFCSNETP-PPV 44

Query: 61  PQEPEEIKDVDNKEFKKMIDQYLKGDEEVLPLIQEAILIRRLSGKHDDTDDEMMDELRMG 120
           PQ    I DVDNKE K  I+ Y KGDE+VLP I E IL R+LSGKH+DTDDE+M+ELRM 
Sbjct: 45  PQ----IDDVDNKELKAQIESYFKGDEQVLPSIMETILKRKLSGKHEDTDDELMEELRMR 100

Query: 121 PLDDVSDREFEEDFEEAHQTDEEIDDLYNARDVVQKRMVHDEYFNMDPKKWDEIVQDGVN 180
           PLDDV DR+FE DFE  H TDEEIDDLYNARDVV KRMV DEYFNMD KKWD+IV+DG+ 
Sbjct: 101 PLDDVDDRDFESDFENIHDTDEEIDDLYNARDVVMKRMVKDEYFNMDDKKWDDIVEDGIK 160

Query: 181 HGFLKDTKECEEILEDMLSWDKLLPDEIKQKVEIKFNELGDMCERGELEPEASYEQFKKF 240
           HG L+DTKECEEILEDMLSWDKLLPDEIKQKVE+KFNELGDMCE+GELEPE +YEQFKKF
Sbjct: 161 HGLLRDTKECEEILEDMLSWDKLLPDEIKQKVEVKFNELGDMCEKGELEPEEAYEQFKKF 220

Query: 241 EDEMVMEYMKIMEKEEAPQSDDTAVPDKKKESDDPPGEGPILRWVTRAVFAPGGDAWHPK 300
           EDE+V EY+  MEKEEAPQ DDT VPDKKK+ DDPPGEGPILRW TR VFAPGGDAWHPK
Sbjct: 221 EDEIVAEYLDKMEKEEAPQFDDTTVPDKKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPK 280

Query: 301 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERYEHREENRKDCLRTLL 360
           NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSER+EHREENRKDCLRTLL
Sbjct: 281 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERFEHREENRKDCLRTLL 340

Query: 361 SLIEEAGKANKLVDNARTSYAKERLRANPAFMARLHAKSMRVRESNQIPA 410
            LIEEAGKANKLVD+AR+SY KERLRANPAFM RLHAKSMR+RESNQ+PA
Sbjct: 341 HLIEEAGKANKLVDDARSSYVKERLRANPAFMERLHAKSMRLRESNQVPA 390


>Glyma08g10020.3 
          Length = 390

 Score =  612 bits (1579), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 310/410 (75%), Positives = 338/410 (82%), Gaps = 20/410 (4%)

Query: 1   MRRTLLRNASLLYTRNXXXXXXXXXXXXXXXXXXXXXXXXXXNRFRPRLFSSDETPKSPV 60
           MRRTL+RN SL YTRN                          +R + RLFSS+E P  PV
Sbjct: 1   MRRTLVRNGSL-YTRNLLHHSALALAAS--------------SRPQFRLFSSNENP-PPV 44

Query: 61  PQEPEEIKDVDNKEFKKMIDQYLKGDEEVLPLIQEAILIRRLSGKHDDTDDEMMDELRMG 120
           PQ    I DV+NKE K  I+ Y KGDE+VLP I EAIL R+LSG H+DTDDE+M+ELRM 
Sbjct: 45  PQ----IDDVNNKELKAQIETYFKGDEKVLPSIMEAILKRKLSGNHEDTDDELMEELRMR 100

Query: 121 PLDDVSDREFEEDFEEAHQTDEEIDDLYNARDVVQKRMVHDEYFNMDPKKWDEIVQDGVN 180
           PLDDV DR+FE DFE  H TDEEIDDLYNARDVV KRMV DEYFNMD KKWD+IV+DG+ 
Sbjct: 101 PLDDVDDRDFESDFESIHDTDEEIDDLYNARDVVMKRMVKDEYFNMDDKKWDDIVEDGIK 160

Query: 181 HGFLKDTKECEEILEDMLSWDKLLPDEIKQKVEIKFNELGDMCERGELEPEASYEQFKKF 240
           HG L+DTKECEEILEDMLSWDKLLPD+IKQKVE+KFNELGDMCERGELEPE +YEQFKKF
Sbjct: 161 HGLLRDTKECEEILEDMLSWDKLLPDDIKQKVEVKFNELGDMCERGELEPEEAYEQFKKF 220

Query: 241 EDEMVMEYMKIMEKEEAPQSDDTAVPDKKKESDDPPGEGPILRWVTRAVFAPGGDAWHPK 300
           EDE+V +Y+  MEKEEA Q DDT VPDKKK+ DDPPGEGPILRW TR VFAPGGDAWHPK
Sbjct: 221 EDEIVAKYLDKMEKEEASQFDDTVVPDKKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPK 280

Query: 301 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERYEHREENRKDCLRTLL 360
           NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSER+EHREENRKDCLRTLL
Sbjct: 281 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERFEHREENRKDCLRTLL 340

Query: 361 SLIEEAGKANKLVDNARTSYAKERLRANPAFMARLHAKSMRVRESNQIPA 410
           SLIEEAGKANKLVD+AR+SY KERL  NPAFM RLHAKSMR+RESNQ+PA
Sbjct: 341 SLIEEAGKANKLVDDARSSYVKERLHTNPAFMERLHAKSMRLRESNQVPA 390


>Glyma08g10020.1 
          Length = 390

 Score =  612 bits (1579), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 310/410 (75%), Positives = 338/410 (82%), Gaps = 20/410 (4%)

Query: 1   MRRTLLRNASLLYTRNXXXXXXXXXXXXXXXXXXXXXXXXXXNRFRPRLFSSDETPKSPV 60
           MRRTL+RN SL YTRN                          +R + RLFSS+E P  PV
Sbjct: 1   MRRTLVRNGSL-YTRNLLHHSALALAAS--------------SRPQFRLFSSNENP-PPV 44

Query: 61  PQEPEEIKDVDNKEFKKMIDQYLKGDEEVLPLIQEAILIRRLSGKHDDTDDEMMDELRMG 120
           PQ    I DV+NKE K  I+ Y KGDE+VLP I EAIL R+LSG H+DTDDE+M+ELRM 
Sbjct: 45  PQ----IDDVNNKELKAQIETYFKGDEKVLPSIMEAILKRKLSGNHEDTDDELMEELRMR 100

Query: 121 PLDDVSDREFEEDFEEAHQTDEEIDDLYNARDVVQKRMVHDEYFNMDPKKWDEIVQDGVN 180
           PLDDV DR+FE DFE  H TDEEIDDLYNARDVV KRMV DEYFNMD KKWD+IV+DG+ 
Sbjct: 101 PLDDVDDRDFESDFESIHDTDEEIDDLYNARDVVMKRMVKDEYFNMDDKKWDDIVEDGIK 160

Query: 181 HGFLKDTKECEEILEDMLSWDKLLPDEIKQKVEIKFNELGDMCERGELEPEASYEQFKKF 240
           HG L+DTKECEEILEDMLSWDKLLPD+IKQKVE+KFNELGDMCERGELEPE +YEQFKKF
Sbjct: 161 HGLLRDTKECEEILEDMLSWDKLLPDDIKQKVEVKFNELGDMCERGELEPEEAYEQFKKF 220

Query: 241 EDEMVMEYMKIMEKEEAPQSDDTAVPDKKKESDDPPGEGPILRWVTRAVFAPGGDAWHPK 300
           EDE+V +Y+  MEKEEA Q DDT VPDKKK+ DDPPGEGPILRW TR VFAPGGDAWHPK
Sbjct: 221 EDEIVAKYLDKMEKEEASQFDDTVVPDKKKDLDDPPGEGPILRWQTRVVFAPGGDAWHPK 280

Query: 301 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERYEHREENRKDCLRTLL 360
           NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSER+EHREENRKDCLRTLL
Sbjct: 281 NRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPGRDELTITSERFEHREENRKDCLRTLL 340

Query: 361 SLIEEAGKANKLVDNARTSYAKERLRANPAFMARLHAKSMRVRESNQIPA 410
           SLIEEAGKANKLVD+AR+SY KERL  NPAFM RLHAKSMR+RESNQ+PA
Sbjct: 341 SLIEEAGKANKLVDDARSSYVKERLHTNPAFMERLHAKSMRLRESNQVPA 390


>Glyma08g10020.2 
          Length = 317

 Score =  557 bits (1436), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/316 (84%), Positives = 289/316 (91%)

Query: 95  EAILIRRLSGKHDDTDDEMMDELRMGPLDDVSDREFEEDFEEAHQTDEEIDDLYNARDVV 154
           EAIL R+LSG H+DTDDE+M+ELRM PLDDV DR+FE DFE  H TDEEIDDLYNARDVV
Sbjct: 2   EAILKRKLSGNHEDTDDELMEELRMRPLDDVDDRDFESDFESIHDTDEEIDDLYNARDVV 61

Query: 155 QKRMVHDEYFNMDPKKWDEIVQDGVNHGFLKDTKECEEILEDMLSWDKLLPDEIKQKVEI 214
            KRMV DEYFNMD KKWD+IV+DG+ HG L+DTKECEEILEDMLSWDKLLPD+IKQKVE+
Sbjct: 62  MKRMVKDEYFNMDDKKWDDIVEDGIKHGLLRDTKECEEILEDMLSWDKLLPDDIKQKVEV 121

Query: 215 KFNELGDMCERGELEPEASYEQFKKFEDEMVMEYMKIMEKEEAPQSDDTAVPDKKKESDD 274
           KFNELGDMCERGELEPE +YEQFKKFEDE+V +Y+  MEKEEA Q DDT VPDKKK+ DD
Sbjct: 122 KFNELGDMCERGELEPEEAYEQFKKFEDEIVAKYLDKMEKEEASQFDDTVVPDKKKDLDD 181

Query: 275 PPGEGPILRWVTRAVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPG 334
           PPGEGPILRW TR VFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPG
Sbjct: 182 PPGEGPILRWQTRVVFAPGGDAWHPKNRKVKLSVTVKELGLSKYQFRRLRELVGKRYHPG 241

Query: 335 RDELTITSERYEHREENRKDCLRTLLSLIEEAGKANKLVDNARTSYAKERLRANPAFMAR 394
           RDELTITSER+EHREENRKDCLRTLLSLIEEAGKANKLVD+AR+SY KERL  NPAFM R
Sbjct: 242 RDELTITSERFEHREENRKDCLRTLLSLIEEAGKANKLVDDARSSYVKERLHTNPAFMER 301

Query: 395 LHAKSMRVRESNQIPA 410
           LHAKSMR+RESNQ+PA
Sbjct: 302 LHAKSMRLRESNQVPA 317


>Glyma11g12010.1 
          Length = 130

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 14/80 (17%)

Query: 140 TDEEIDDLYNARDVVQKRMVHDEYFNMDPKKWDEIVQDGVNHGFLKDTKECEEILEDMLS 199
           T+EEIDDLYNARDVV KRMV DEYFNMD KKWD+IV+DG+ H                  
Sbjct: 35  TNEEIDDLYNARDVVMKRMVKDEYFNMDDKKWDDIVEDGIKHS--------------RWM 80

Query: 200 WDKLLPDEIKQKVEIKFNEL 219
           W K+ P  +  +V  KF E 
Sbjct: 81  WLKMAPRTMYNRVNKKFMEC 100


>Glyma20g31240.1 
          Length = 136

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 13/66 (19%)

Query: 105 KHDDTDDEMMDELRMGPLDDVSDREFEEDFEEAHQTDEEIDDLYNARDVVQKRMVHDEYF 164
           KH+DTDD           +D+  R+FE DFE+ H T+EEIDDLYN R+V  KRMV   YF
Sbjct: 19  KHEDTDD-----------NDI--RDFESDFEDTHDTNEEIDDLYNGRNVEMKRMVKAGYF 65

Query: 165 NMDPKK 170
           NMD KK
Sbjct: 66  NMDDKK 71


>Glyma17g21580.1 
          Length = 69

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 75  FKKMIDQYLKGDEEVLPLIQEAILIRRLSGKHDDTDDEMMDELRMGPL 122
            K  I+ Y KGD  VLP I EA L  +LSGK + T+D++M+ELRM PL
Sbjct: 1   LKAQIESYFKGDGHVLPSIMEATLKWKLSGKLEGTNDKLMEELRMCPL 48


>Glyma09g31180.1 
          Length = 148

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 7/78 (8%)

Query: 47  PRLFSSDETP------KSPVPQEPEEI-KDVDNKEFKKMIDQYLKGDEEVLPLIQEAILI 99
           P +FS   T       +S VP +P  + +D+ N+E K+ + +  +GD E +P + EAIL 
Sbjct: 22  PSIFSPTATAPTSFSSRSHVPDKPHSLLEDISNEELKRRVAKLQEGDAEAIPSVFEAILQ 81

Query: 100 RRLSGKHDDTDDEMMDEL 117
           R L+GK  + D+E+M E+
Sbjct: 82  RYLAGKPIEADEELMREI 99