Miyakogusa Predicted Gene

Lj4g3v2400890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400890.1 Non Chatacterized Hit- tr|I1KNA8|I1KNA8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17400 PE,90,0.0000009,
,AV780028.path1.1
         (38 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g38810.2                                                        58   2e-09
Glyma07g38810.1                                                        58   2e-09
Glyma17g01910.1                                                        54   5e-08

>Glyma07g38810.2 
          Length = 385

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 27/30 (90%)

Query: 6   ICDTKRKLQTLLSLIQSDTPESGIIFVGEQ 35
           ICDTKRKL TLLSLIQSD PESGIIFV EQ
Sbjct: 222 ICDTKRKLHTLLSLIQSDAPESGIIFVAEQ 251


>Glyma07g38810.1 
          Length = 385

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 27/30 (90%)

Query: 6   ICDTKRKLQTLLSLIQSDTPESGIIFVGEQ 35
           ICDTKRKL TLLSLIQSD PESGIIFV EQ
Sbjct: 222 ICDTKRKLHTLLSLIQSDAPESGIIFVAEQ 251


>Glyma17g01910.1 
          Length = 230

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/30 (86%), Positives = 26/30 (86%)

Query: 6  ICDTKRKLQTLLSLIQSDTPESGIIFVGEQ 35
          I DTKRKLQTLLSLIQSD PE GIIFV EQ
Sbjct: 65 ISDTKRKLQTLLSLIQSDAPEFGIIFVAEQ 94