Miyakogusa Predicted Gene

Lj4g3v2400580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400580.1 tr|B9GWT3|B9GWT3_POPTR Tir-nbs resistance protein
OS=Populus trichocarpa GN=POPTRDRAFT_554389 PE=4
S,27.78,0.029,seg,NULL,CUFF.50918.1
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02040.1                                                       265   1e-71
Glyma07g38660.1                                                       250   4e-67
Glyma15g11080.1                                                       238   1e-63
Glyma13g27950.1                                                       237   5e-63
Glyma07g38610.1                                                       139   1e-33
Glyma17g02090.1                                                        74   5e-14

>Glyma17g02040.1 
          Length = 151

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 130/155 (83%), Positives = 136/155 (87%), Gaps = 4/155 (2%)

Query: 12  MGKVQGFSLVPFGGCFDSCRDHTQGSGNGTRIWNLSDRPVELQIRVGSILKKIHTLKPGS 71
           MGKVQGFSL+ FGGCFD CRDHTQGSG GTRIWNLSDRPVELQIRVGSILKKIHTLKPGS
Sbjct: 1   MGKVQGFSLLSFGGCFDGCRDHTQGSGYGTRIWNLSDRPVELQIRVGSILKKIHTLKPGS 60

Query: 72  SKRVKCKSIYKAYMPVAAXXXXXXXXRSLKNLLYYYDETCHPYIWIHDTGCHSLRMVKQQ 131
           SKR+K KSIYKAYMP  +         SLK+LLYYYDET HPYIWIHDTGCHSLRM KQQ
Sbjct: 61  SKRLKSKSIYKAYMPGRSGSVGG----SLKSLLYYYDETYHPYIWIHDTGCHSLRMAKQQ 116

Query: 132 YISLEDLRDSSEIRIFRDHQRGSISVRKRTRPDLC 166
           YISLEDLRDSSEI++F DHQRGSISVRKRTRPD C
Sbjct: 117 YISLEDLRDSSEIKVFWDHQRGSISVRKRTRPDFC 151


>Glyma07g38660.1 
          Length = 151

 Score =  250 bits (639), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 125/155 (80%), Positives = 132/155 (85%), Gaps = 4/155 (2%)

Query: 12  MGKVQGFSLVPFGGCFDSCRDHTQGSGNGTRIWNLSDRPVELQIRVGSILKKIHTLKPGS 71
           MGKVQGFSL  FGGCFDSCRDH+QGSG GTRIWNLSDRPVELQIRVGSILKKIHTLKPGS
Sbjct: 1   MGKVQGFSLRSFGGCFDSCRDHSQGSGYGTRIWNLSDRPVELQIRVGSILKKIHTLKPGS 60

Query: 72  SKRVKCKSIYKAYMPVAAXXXXXXXXRSLKNLLYYYDETCHPYIWIHDTGCHSLRMVKQQ 131
           SKR+KCKSIYKAY+P  +         SLK+LLYYYDETC PYI I DTGC SLRM KQQ
Sbjct: 61  SKRLKCKSIYKAYIPGGSGSVGG----SLKSLLYYYDETCQPYILIRDTGCQSLRMAKQQ 116

Query: 132 YISLEDLRDSSEIRIFRDHQRGSISVRKRTRPDLC 166
           YISLEDLRDSSEI++F DH RGSISVR RTRPD C
Sbjct: 117 YISLEDLRDSSEIKVFWDHLRGSISVRTRTRPDFC 151


>Glyma15g11080.1 
          Length = 160

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 117/162 (72%), Positives = 129/162 (79%), Gaps = 4/162 (2%)

Query: 5   KKQFKSLMGKVQGFSLVPFGGCFDSCRDHTQGSGNGTRIWNLSDRPVELQIRVGSILKKI 64
           K++ ++LMGKV+G SL+  GGCFD C DHTQ  G GTRIWN SDRPVELQIRVGSILKK+
Sbjct: 3   KRELETLMGKVRGLSLLSLGGCFDGCYDHTQAYGLGTRIWNFSDRPVELQIRVGSILKKV 62

Query: 65  HTLKPGSSKRVKCKSIYKAYMPVAAXXXXXXXXRSLKNLLYYYDETCHPYIWIHDTGCHS 124
           HTLKPGS KR++ K IYKAYMP             LK+LLYYYDETCHPY+WIHD G  S
Sbjct: 63  HTLKPGSCKRLRSKRIYKAYMPGKNGNDGV----GLKSLLYYYDETCHPYVWIHDIGGDS 118

Query: 125 LRMVKQQYISLEDLRDSSEIRIFRDHQRGSISVRKRTRPDLC 166
           +RMVKQQYISLEDLRDSSEIRIFRD QRG ISV KRTR DLC
Sbjct: 119 MRMVKQQYISLEDLRDSSEIRIFRDQQRGCISVLKRTRLDLC 160


>Glyma13g27950.1 
          Length = 159

 Score =  237 bits (604), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 128/161 (79%), Gaps = 4/161 (2%)

Query: 6   KQFKSLMGKVQGFSLVPFGGCFDSCRDHTQGSGNGTRIWNLSDRPVELQIRVGSILKKIH 65
           K+ ++LMGKV+G SL+  GGCFD C DHTQ  G GTRIWN SDRPVELQIRVGSILKK+H
Sbjct: 3   KELETLMGKVRGLSLLSLGGCFDGCYDHTQAYGLGTRIWNFSDRPVELQIRVGSILKKVH 62

Query: 66  TLKPGSSKRVKCKSIYKAYMPVAAXXXXXXXXRSLKNLLYYYDETCHPYIWIHDTGCHSL 125
           TLKPGS KR++ K IYKAYMP  +          LK+LLYYYDETCHPY+WIHD G  S+
Sbjct: 63  TLKPGSCKRLRSKRIYKAYMPGKSGNDGG----GLKSLLYYYDETCHPYVWIHDIGGGSM 118

Query: 126 RMVKQQYISLEDLRDSSEIRIFRDHQRGSISVRKRTRPDLC 166
           RMVKQQYISLE+LRDSSEIRI RD QRG ISV KRTRPD C
Sbjct: 119 RMVKQQYISLENLRDSSEIRILRDQQRGCISVLKRTRPDFC 159


>Glyma07g38610.1 
          Length = 146

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 92/142 (64%), Gaps = 31/142 (21%)

Query: 15  VQGFSLVPFGGCFDSCRDHTQGSGNGTRIWNLSDRPVELQIRVGSILKKIHTLKPGSSKR 74
           +Q FSL+ FGGCFDSCRD  QG+G GTRIW LSDRPVELQ+R+GS LKK HTLK G+   
Sbjct: 27  LQSFSLLSFGGCFDSCRDLPQGTGYGTRIWYLSDRPVELQVRLGSSLKKFHTLKQGA--- 83

Query: 75  VKCKSIYKAYMPVAAXXXXXXXXRSLKNLLYYYDETCHPYIWIHDTGCHSLRMVKQQYIS 134
             C ++ K                 L  L++          WIHDTGCHSLRMVKQQYIS
Sbjct: 84  -YCIAMMK-----------------LVTLIF----------WIHDTGCHSLRMVKQQYIS 115

Query: 135 LEDLRDSSEIRIFRDHQRGSIS 156
           L+D RDSSE++I  DH+R  +S
Sbjct: 116 LKDPRDSSEMKICWDHERFYLS 137


>Glyma17g02090.1 
          Length = 82

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 51/103 (49%), Gaps = 31/103 (30%)

Query: 42  RIWNLSDRPVELQIRVGSILKKIHTLKPGSSKRVKCKSIYKAYMPVAAXXXXXXXXRSLK 101
           RIW LSDRPVELQ+RVG  LKK     P     +K  ++Y                    
Sbjct: 5   RIWYLSDRPVELQVRVGPTLKKNRRFTPYCVAMMKLATLY-------------------- 44

Query: 102 NLLYYYDETCHPYIWIHDTGCHSLRMVKQQYISLEDLRDSSEI 144
                      PYIWI+D GCH L MVKQQYIS +D R+SS I
Sbjct: 45  -----------PYIWIYDRGCHFLTMVKQQYISHQDRRESSGI 76