Miyakogusa Predicted Gene
- Lj4g3v2375050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2375050.1 Non Chatacterized Hit- tr|D0N6P6|D0N6P6_PHYIT
Putative uncharacterized protein OS=Phytophthora infes,32.35,3e-16,RNA
METHYLTRANSFERASE,NULL; alpha/beta knot,NULL; no description,NULL;
SpoU_methylase,tRNA/rRNA meth,CUFF.50895.1
(220 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g02380.1 395 e-110
Glyma07g38380.1 124 8e-29
Glyma06g38190.1 123 1e-28
Glyma08g26320.1 55 6e-08
>Glyma17g02380.1
Length = 228
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/220 (87%), Positives = 206/220 (93%), Gaps = 2/220 (0%)
Query: 1 MGWESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNSFGSHGSSNHLRFRHFHS 60
MGWES+VVVHNIAKRHNVGTLARSATAFGV+ELILVGRRDFN FGSHGSS+HLRFRHFHS
Sbjct: 11 MGWESFVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNCFGSHGSSSHLRFRHFHS 70
Query: 61 LQDARHYLKHERDCDICGVEITDDALPVNHQPFSKNTAFLLGNEGSGLSPKEVEICDFFV 120
LQDAR +LK ++D DICGVEIT D+LPVN PF+K+TAFLLGNEG+GLSPKE+EICDFFV
Sbjct: 71 LQDARKFLK-DKDFDICGVEITTDSLPVNQHPFTKSTAFLLGNEGTGLSPKEIEICDFFV 129
Query: 121 YIPQYGGGTASLNVTVAASIVLHHFAVWAGFDERSRDGNKFVVAERPVKQSRRNYCAEAE 180
YIPQYGGGTASLNVTVAASIVLHHF VWAGF ERSRDGNKFVVAERPVKQ RNYC E E
Sbjct: 130 YIPQYGGGTASLNVTVAASIVLHHFGVWAGFTERSRDGNKFVVAERPVKQGGRNYCTETE 189
Query: 181 ESVIEERKARRENAANGGFFDETESGNSSSSLLDALFVDG 220
+S+IEERKARRENAAN GFFDETESGNSSS+LLDALFVDG
Sbjct: 190 DSIIEERKARRENAAN-GFFDETESGNSSSNLLDALFVDG 228
>Glyma07g38380.1
Length = 72
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
Query: 148 WAGFDERSRDGNKFVVAERPVKQSRRNYCAEAEESVIEERKARRENAANGGFFDETESGN 207
WA F ERSRDGNKFVVA RPVKQ RRNYC E E+S+IEERKARRENAA+ GFFDETESGN
Sbjct: 1 WADFTERSRDGNKFVVAARPVKQVRRNYCTETEDSIIEERKARRENAAS-GFFDETESGN 59
Query: 208 SSSSLLDALFVDG 220
SSS+LLDALFVDG
Sbjct: 60 SSSNLLDALFVDG 72
>Glyma06g38190.1
Length = 181
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Query: 61 LQDARHYLKHERDCDICGVEITDDALPVNHQPFSKNTAFLLGNEGSGLSPKEVEICDFFV 120
L +A ++LK ++DCDICG+EIT+DALP+N PF+K+TAFLLGNEG+ LSPKE+EICD F
Sbjct: 24 LTNACNFLK-DKDCDICGIEITNDALPINQHPFNKSTAFLLGNEGTDLSPKEIEICDSFD 82
Query: 121 YIPQYGGGTASLNVTVAASIV 141
YI QYGG TASLNVT+A SIV
Sbjct: 83 YILQYGGDTASLNVTIATSIV 103
>Glyma08g26320.1
Length = 322
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 7 VVVHNIAKRHNVGTLARSATAFGVTELILVG-----RRDFNSFGSHGSSNHLRFRHFHSL 61
+VV + NV RSA A GV + +V R N S G+ L + S
Sbjct: 131 LVVEGLCDFGNVSATFRSADALGVQSVHVVSCDANKRYKDNRHVSMGAEKWLDIELWDST 190
Query: 62 QDARHYLKHERDCDICGVEITDDALPVNHQPFSKNTAFLLGNEGSGLSPKEVEICDFFVY 121
++ LK R I + DA+ ++ +S TA ++GNE G+S + +E+ D
Sbjct: 191 KECFKMLK-SRGYRIATTHVGMDAVSIHDLDWSCPTAIVVGNENRGISDEALELSDLHCS 249
Query: 122 IPQYGGGTASLNVTVAASIVLHH 144
IP G S NV+VAA I++HH
Sbjct: 250 IPM-AGMVDSFNVSVAAGILMHH 271