Miyakogusa Predicted Gene

Lj4g3v2371690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2371690.1 tr|C1E813|C1E813_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_59212
,25.2,0.0003,no description,NULL; F-box domain,F-box domain,
cyclin-like; A Receptor for Ubiquitination Targets,F,CUFF.50846.1
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g38120.1                                                       360   e-100
Glyma17g02590.1                                                       335   2e-92
Glyma17g02590.2                                                       284   7e-77
Glyma17g02590.3                                                       266   2e-71

>Glyma07g38120.1 
          Length = 254

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/256 (69%), Positives = 204/256 (79%), Gaps = 6/256 (2%)

Query: 6   QLDPVPVLASLPQDVTFKITSLLQVRDLCALGCCSRFCRDLCFSDCIWESLVRTRWXXXX 65
           + D V +L+SLP+DV  KI SLLQVRDLCALGCCSRF R+LCFSDCIWESLVR RW    
Sbjct: 5   KADSVSILSSLPEDVALKIASLLQVRDLCALGCCSRFWRELCFSDCIWESLVRNRWPLLS 64

Query: 66  XXXXXXXXXXXXXXXXXXNPKKWRKFYFERHVELGLRARTVEMFLKACSPSESLEVGDYL 125
                             N KKWRK Y ER VELGLRAR+V  FL+ACS SESLEVGDYL
Sbjct: 65  SFHFPSSSTHSP------NFKKWRKLYLERQVELGLRARSVVKFLEACSRSESLEVGDYL 118

Query: 126 KAVDTLVGLRFGFEDIQRYLFNPKMNVLINLVGLHYCLSSLGIRGENLLEVLRTCEISDR 185
           KAVDTL+G  FGFED+QR+LFNP+MNVLINLVGLHYCL++LGI G+NL+E LRT EISDR
Sbjct: 119 KAVDTLIGTMFGFEDVQRFLFNPQMNVLINLVGLHYCLTTLGIPGDNLVEALRTHEISDR 178

Query: 186 RVVVKWWKLGRWLHGYRMRDEFHSRWVSLADLATQDDGNVLGVLRRGTIHEVLRVQISAV 245
           RV +KWWK+GRW +G+RMRDE HSRWVSLADLAT+DD +VLGVLRRGT+HEVLRVQIS V
Sbjct: 179 RVCIKWWKVGRWYYGFRMRDESHSRWVSLADLATEDDEHVLGVLRRGTVHEVLRVQISVV 238

Query: 246 GHTTTSWSYQLTHRLQ 261
           G  +T WS Q+T RL+
Sbjct: 239 GRPSTPWSCQITQRLE 254


>Glyma17g02590.1 
          Length = 265

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 165/253 (65%), Positives = 194/253 (76%), Gaps = 5/253 (1%)

Query: 6   QLDPVPVLASLPQDVTFKITSLLQVRDLCALGCCSRFCRDLCFSDCIWESLVRTRWXXXX 65
           + D + +++SLP+DV  KI SLLQVRDLCALGCCS F ++LCFSDCIWESLVR RW    
Sbjct: 5   KADSISIISSLPEDVALKIASLLQVRDLCALGCCSMFWKELCFSDCIWESLVRNRWPSLS 64

Query: 66  XXXXXXXXXXXXXXXXX-----XNPKKWRKFYFERHVELGLRARTVEMFLKACSPSESLE 120
                                    +KWRK Y ERHVELG+RAR+V  FL+ACS SESLE
Sbjct: 65  SFHFPSSSSTHSPSFEKLFVWKIGLQKWRKLYLERHVELGVRARSVVKFLEACSRSESLE 124

Query: 121 VGDYLKAVDTLVGLRFGFEDIQRYLFNPKMNVLINLVGLHYCLSSLGIRGENLLEVLRTC 180
           VGDYLKAVDTL+G  FGFED+QR+LFNP+MNVLINLVG+HYCL++LGI G+NL+E LR  
Sbjct: 125 VGDYLKAVDTLIGTMFGFEDVQRFLFNPQMNVLINLVGVHYCLTTLGIPGDNLVEALRIH 184

Query: 181 EISDRRVVVKWWKLGRWLHGYRMRDEFHSRWVSLADLATQDDGNVLGVLRRGTIHEVLRV 240
           EISDRRV V+WWK+GRW +G+RMRDE HSRWVSLADLAT+DD +VLGVLRRG +HEVLRV
Sbjct: 185 EISDRRVCVRWWKVGRWYYGFRMRDESHSRWVSLADLATEDDEHVLGVLRRGAVHEVLRV 244

Query: 241 QISAVGHTTTSWS 253
           QIS VG  +  WS
Sbjct: 245 QISVVGRPSKPWS 257


>Glyma17g02590.2 
          Length = 226

 Score =  284 bits (726), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 142/217 (65%), Positives = 165/217 (76%), Gaps = 5/217 (2%)

Query: 42  FCRDLCFSDCIWESLVRTRWXXXXXXXXXXXXXXXXXXXXX-----XNPKKWRKFYFERH 96
           F ++LCFSDCIWESLVR RW                             +KWRK Y ERH
Sbjct: 2   FWKELCFSDCIWESLVRNRWPSLSSFHFPSSSSTHSPSFEKLFVWKIGLQKWRKLYLERH 61

Query: 97  VELGLRARTVEMFLKACSPSESLEVGDYLKAVDTLVGLRFGFEDIQRYLFNPKMNVLINL 156
           VELG+RAR+V  FL+ACS SESLEVGDYLKAVDTL+G  FGFED+QR+LFNP+MNVLINL
Sbjct: 62  VELGVRARSVVKFLEACSRSESLEVGDYLKAVDTLIGTMFGFEDVQRFLFNPQMNVLINL 121

Query: 157 VGLHYCLSSLGIRGENLLEVLRTCEISDRRVVVKWWKLGRWLHGYRMRDEFHSRWVSLAD 216
           VG+HYCL++LGI G+NL+E LR  EISDRRV V+WWK+GRW +G+RMRDE HSRWVSLAD
Sbjct: 122 VGVHYCLTTLGIPGDNLVEALRIHEISDRRVCVRWWKVGRWYYGFRMRDESHSRWVSLAD 181

Query: 217 LATQDDGNVLGVLRRGTIHEVLRVQISAVGHTTTSWS 253
           LAT+DD +VLGVLRRG +HEVLRVQIS VG  +  WS
Sbjct: 182 LATEDDEHVLGVLRRGAVHEVLRVQISVVGRPSKPWS 218


>Glyma17g02590.3 
          Length = 208

 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/168 (75%), Positives = 147/168 (87%)

Query: 86  KKWRKFYFERHVELGLRARTVEMFLKACSPSESLEVGDYLKAVDTLVGLRFGFEDIQRYL 145
           +KWRK Y ERHVELG+RAR+V  FL+ACS SESLEVGDYLKAVDTL+G  FGFED+QR+L
Sbjct: 33  QKWRKLYLERHVELGVRARSVVKFLEACSRSESLEVGDYLKAVDTLIGTMFGFEDVQRFL 92

Query: 146 FNPKMNVLINLVGLHYCLSSLGIRGENLLEVLRTCEISDRRVVVKWWKLGRWLHGYRMRD 205
           FNP+MNVLINLVG+HYCL++LGI G+NL+E LR  EISDRRV V+WWK+GRW +G+RMRD
Sbjct: 93  FNPQMNVLINLVGVHYCLTTLGIPGDNLVEALRIHEISDRRVCVRWWKVGRWYYGFRMRD 152

Query: 206 EFHSRWVSLADLATQDDGNVLGVLRRGTIHEVLRVQISAVGHTTTSWS 253
           E HSRWVSLADLAT+DD +VLGVLRRG +HEVLRVQIS VG  +  WS
Sbjct: 153 ESHSRWVSLADLATEDDEHVLGVLRRGAVHEVLRVQISVVGRPSKPWS 200