Miyakogusa Predicted Gene
- Lj4g3v2371650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2371650.1 tr|B9P6U2|B9P6U2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_593580 PE=3
SV=1,56.76,1e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; seg,NULL; A_tha_TI,CUFF.50841.1
(193 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g38090.1 191 3e-49
Glyma17g02610.1 172 2e-43
Glyma15g10410.1 157 5e-39
Glyma19g39450.1 116 2e-26
Glyma03g36800.1 116 2e-26
Glyma08g13620.1 74 1e-13
Glyma05g30480.1 73 1e-13
Glyma15g22100.1 71 7e-13
Glyma13g28680.1 69 3e-12
Glyma17g02600.1 69 3e-12
Glyma07g38110.1 66 2e-11
Glyma09g09990.1 64 9e-11
Glyma20g04460.2 58 6e-09
Glyma20g04460.1 58 6e-09
Glyma20g04470.1 57 1e-08
Glyma07g38110.2 56 3e-08
Glyma02g12200.1 55 5e-08
Glyma16g05560.1 54 1e-07
Glyma07g31610.1 54 1e-07
Glyma19g27220.1 53 2e-07
Glyma14g38970.1 49 4e-06
>Glyma07g38090.1
Length = 188
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 111/159 (69%), Gaps = 6/159 (3%)
Query: 10 MEGVENSKGRE-----KAAVGGACDXXXXXXXXXXXXXXXIVVGVDNHTKVVPIKILDGL 64
MEGVE SK RE AV G CD IV+ VD TK+VPI++ D
Sbjct: 1 MEGVE-SKEREVMVAKPVAVVGVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSF 59
Query: 65 PPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMV 124
PP+NVP+ AKWH +SAFVYFLV NAIA TY A SL+LA++N+GKS+GL +LI VLD MV
Sbjct: 60 PPLNVPLTAKWHQMSAFVYFLVTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMV 119
Query: 125 ALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
ALLFSGNGAA+AVG+LGY GNSHV W KVCNVF FC Q
Sbjct: 120 ALLFSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQ 158
>Glyma17g02610.1
Length = 187
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 109/159 (68%), Gaps = 5/159 (3%)
Query: 10 MEGVENSKGRE----KAAVGGACDXXXXXXXXXXXXXXXIVVGVDNHTKVVPIKILDGLP 65
MEGVE SK RE K G D IV+ VD TKVVPI++ D LP
Sbjct: 1 MEGVE-SKEREVMVAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLP 59
Query: 66 PVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMVA 125
P++VP+ AKWH +SA VYFLV NAIA TY SL+LA++N+GKS+GL +LI VLDA MVA
Sbjct: 60 PLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVA 119
Query: 126 LLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQF 164
LLFSGNGAA+AVGVLGY GNSHV W KVCNVF FC Q
Sbjct: 120 LLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQM 158
>Glyma15g10410.1
Length = 188
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 104/166 (62%), Gaps = 12/166 (7%)
Query: 1 MEGQGKAM--MMEGVENSKGREKAAVGGACDXXXXXXXXXXXXXXXIVVGVDNHTKVVPI 58
MEGQ K +MEG E KGRE +V+G D T +VPI
Sbjct: 1 MEGQSKGSFNVMEGSEG-KGREFVV--------EKILAFLLTLVAAVVIGTDKQTAIVPI 51
Query: 59 KILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRG-LGSLIT 117
K++D +P + VPV AKWHYLSAFVY++ ANAIA Y SL+L + N+ K +G + +LIT
Sbjct: 52 KLVDSMPTLYVPVAAKWHYLSAFVYYVGANAIACAYAILSLLLTLANRRKGKGTMETLIT 111
Query: 118 VLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
VLD +MVALLFSGNGAA AVG+LG GNSHV W KVCN F FC Q
Sbjct: 112 VLDTVMVALLFSGNGAAMAVGLLGLQGNSHVHWNKVCNEFGKFCDQ 157
>Glyma19g39450.1
Length = 192
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 10/123 (8%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
I+VGVDN TKV+ + AKW Y+SA V+FLV NAIA +Y A SLV+ ++
Sbjct: 44 IIVGVDNETKVI------SYAEMQFKATAKWEYVSAIVFFLVINAIACSYAAASLVITLM 97
Query: 105 NKGKSRGLGSL----ITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNF 160
+ R + +T LD +M+ALLFS NGAA AVGV+ GNSHVQW KVCNVFD +
Sbjct: 98 GRSSGRKNNDVTLLGLTALDLVMMALLFSANGAACAVGVIAQKGNSHVQWMKVCNVFDAY 157
Query: 161 CHQ 163
C
Sbjct: 158 CRH 160
>Glyma03g36800.1
Length = 193
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 78/124 (62%), Gaps = 13/124 (10%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
I+VGVDN TKV+ + AKW Y+SA V+FLV NAIA +Y A SLV+ ++
Sbjct: 46 IIVGVDNETKVI------SYAEMQFKATAKWEYVSAIVFFLVINAIACSYAAASLVITLM 99
Query: 105 NKGKSRG-----LGSLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDN 159
+ R LG +T LD +M+ALLFS NGAA AVGV+ GNSHVQW KVCNVFD
Sbjct: 100 ARSNGRKNDVTLLG--LTALDLVMMALLFSANGAACAVGVIAQKGNSHVQWMKVCNVFDA 157
Query: 160 FCHQ 163
+C
Sbjct: 158 YCRH 161
>Glyma08g13620.1
Length = 194
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ + TK + + + G PV + + A + + AF +F++ NAIAS Y + + I+
Sbjct: 43 LVMAFNKQTKSMVVATI-GTNPVTITLTAMFQHTPAFTFFVIVNAIASFYNMVVIGVEIL 101
Query: 105 NKG---KSRGLGSLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
K LG LI +LD + +AL +G+GAA+ + LG GNSH +W K+C+ F+ +C
Sbjct: 102 GPQYDYKELRLG-LIAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYC 160
Query: 162 HQ 163
++
Sbjct: 161 NR 162
>Glyma05g30480.1
Length = 194
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ + TK + + + G PV + + A + + AF++F++ NAIAS Y + + I+
Sbjct: 43 LVMAFNKQTKGMVVATI-GTNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVIGVEIL 101
Query: 105 N-----KGKSRGLGSLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDN 159
KG GL I +LD + +AL +G+GAA+ + LG GNSH +W K+C+ F+
Sbjct: 102 GPQYDYKGLRLGL---IAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEA 158
Query: 160 FCHQ 163
+C++
Sbjct: 159 YCNR 162
>Glyma15g22100.1
Length = 165
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ + TK + + G P+ + AK++ AFV+F++AN AS + +V+ ++
Sbjct: 18 LVMTFNKQTKSFVVATV-GSTPITATLAAKFNQTPAFVFFVIANGNASLHNLVMIVMEVL 76
Query: 105 N-KGKSRGLG-SLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCH 162
+ +GL +LI +LD + +AL +G+GAA+ + LG GNSH +W K+C+ F+ +C+
Sbjct: 77 GPRYDYKGLRLALIAILDMMTMALASAGDGAATFMSELGKNGNSHARWDKICDKFETYCN 136
Query: 163 Q 163
+
Sbjct: 137 R 137
>Glyma13g28680.1
Length = 189
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 67 VNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLV--LAIINKG--KSRGLGSLITVLDAL 122
V +P PAK+ Y AFVYF+ A +++ Y S + +++I K K + L I DAL
Sbjct: 58 VLLPQPAKFKYSPAFVYFVAAFSVSGLYALVSALASISVIQKPGFKLKFLLHFI-FWDAL 116
Query: 123 MVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQF 164
++ + S GAA +V +G GNSHV W KVCN++D FC
Sbjct: 117 ILGITASATGAAGSVAYIGLKGNSHVGWIKVCNIYDKFCRHL 158
>Glyma17g02600.1
Length = 193
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ N T+V+ L P VP PAK+ Y AFVYF+ A ++ Y + + ++
Sbjct: 46 VVIVTGNQTEVI-------LVPQPVPWPAKFRYTPAFVYFVAALSVTGLYSIITTLASLF 98
Query: 105 NKGKSRGLGSLI---TVLDALMVALLFSGNGAASAVGVLGYYGNSHVQ-WKKVCNVFDNF 160
K L+ + DAL++ ++ S G A V LG GNSHV W K+C+V+D F
Sbjct: 99 ASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGNSHVVGWNKICHVYDKF 158
Query: 161 CHQ 163
C
Sbjct: 159 CRH 161
>Glyma07g38110.1
Length = 193
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ N T+V+ + P VP PAK+ Y AFVYF+ A ++ Y + + ++
Sbjct: 46 VVIVTANQTEVIRV-------PQPVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLF 98
Query: 105 NKGKSRGLGSLI---TVLDALMVALLFSGNGAASAVGVLGYYGNSHVQ-WKKVCNVFDNF 160
K L+ + DAL++ ++ S G A V LG GN HV W K+C+V+D F
Sbjct: 99 ASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHVYDKF 158
Query: 161 CHQ 163
C
Sbjct: 159 CRH 161
>Glyma09g09990.1
Length = 169
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ + TK + + G P+ AK++ AFV+F++AN A+ + ++ I
Sbjct: 18 LVMAFNKQTKSFVVATV-GSTPITATFAAKFNQTPAFVFFVIANGNAALHNNLVMIAMEI 76
Query: 105 NKGKSRGLG---SLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
+ G +LI +LD + +AL G+GAA+ + LG GNSH +W K+C+ F+ +C
Sbjct: 77 LGTRYDYKGPRLALIAILDMMTMALASDGDGAATFMSELGKNGNSHAKWDKICDKFETYC 136
Query: 162 HQ 163
+
Sbjct: 137 DR 138
>Glyma20g04460.2
Length = 186
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 78 LSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGS--LITVLDALMVALLFSGNGAAS 135
L FV+F+ +N+I Y SLVL+ + +S + S L LD +M LL +G AA+
Sbjct: 70 LPTFVFFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSKVLQVFLDTVMYGLLTTGASAAT 129
Query: 136 AVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
A+ +YGNS+ W C ++ FC Q
Sbjct: 130 AIVYEAHYGNSNTNWFPFCRQYNRFCKQ 157
>Glyma20g04460.1
Length = 186
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 78 LSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGS--LITVLDALMVALLFSGNGAAS 135
L FV+F+ +N+I Y SLVL+ + +S + S L LD +M LL +G AA+
Sbjct: 70 LPTFVFFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSKVLQVFLDTVMYGLLTTGASAAT 129
Query: 136 AVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
A+ +YGNS+ W C ++ FC Q
Sbjct: 130 AIVYEAHYGNSNTNWFPFCRQYNRFCKQ 157
>Glyma20g04470.1
Length = 186
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 80 AFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGS--LITVLDALMVALLFSGNGAASAV 137
FV+F+ +N+I Y SLVL+ + +S + S L LD +M LL +G AA+A+
Sbjct: 72 TFVFFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSRVLQVFLDTVMYGLLTTGASAATAI 131
Query: 138 GVLGYYGNSHVQWKKVCNVFDNFCHQ 163
+YGNS+ W C +++FC Q
Sbjct: 132 VYEAHYGNSNTNWFPFCRQYNHFCKQ 157
>Glyma07g38110.2
Length = 180
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 45 IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
+V+ N T+V+ + P VP PAK+ Y AFV + +AS + + L
Sbjct: 46 VVIVTANQTEVIRV-------PQPVPWPAKFRYSPAFV---IITTLASLFASNKPAL--- 92
Query: 105 NKGKSRGLGSLITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQ-WKKVCNVFDNFCHQ 163
K++ L I + DAL++ ++ S G A V LG GN HV W K+C+V+D FC
Sbjct: 93 ---KTKLLLYFI-LWDALILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHVYDKFCRH 148
>Glyma02g12200.1
Length = 186
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 73 AKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGS--LITVLDALMVALLFSG 130
A++ L + V+F++ANA+ Y SL++++ + +S + S L+ LD +M++L+ +
Sbjct: 65 AEFDDLPSLVFFVMANAVVCGYLVLSLMISVFHILRSTAVKSRILLVALDTVMLSLVTAS 124
Query: 131 NGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
AA+++ + + GN+ W +C ++NFC +
Sbjct: 125 ASAATSIVYIAHNGNTGANWFAICQQYNNFCER 157
>Glyma16g05560.1
Length = 161
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 73 AKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVL-DALMVALLFSGN 131
A ++Y +F +F+ AN + +LVL + K ++ L D +M+ LL +G
Sbjct: 37 AHFYYSPSFKFFVAANGVVVALSLLTLVLNFLMKRQASPRYHFFLFLHDIVMMVLLIAGC 96
Query: 132 GAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
AA+A+G +G +G HV W+ +C+ FC
Sbjct: 97 AAATAIGYVGQFGEDHVGWQPICDHVRKFC 126
>Glyma07g31610.1
Length = 160
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 68 NVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMVALL 127
N+ AK+ AF YF+VA AIA Y L ++ LG L+ +LD ++ LL
Sbjct: 38 NLTFTAKYSNDPAFKYFVVAEAIACGYS-----LILLFTCSQTSLGRLVLILDVVIAMLL 92
Query: 128 FSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
S AA A+ +G GN+H W +C FC
Sbjct: 93 TSSVSAALAIAHVGKKGNTHAGWLPICGQVPKFC 126
>Glyma19g27220.1
Length = 145
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 73 AKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVL-DALMVALLFSGN 131
A ++Y +F +F+ AN + +++L + K ++ + L D +M LL +G
Sbjct: 21 AHFYYSPSFKFFVAANGVVVAMSLLTIILNFLMKHQASPIYHFFLFLHDIVMTVLLIAGC 80
Query: 132 GAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
AA+A+G +G +G HV W+ +C+ FC
Sbjct: 81 AAATAIGYVGKFGEEHVGWQPICDHVRKFC 110
>Glyma14g38970.1
Length = 208
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 78 LSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMVALLFSGNGAASAV 137
L AF Y + AN I + Y FS + + + S + VLD ++ ++ S A++ V
Sbjct: 74 LGAFRYLVHANGICAGYSLFSAIFVALPRLSSMHIAWTFFVLDQVLTYIILSAGAASAEV 133
Query: 138 GVLGYYGNSHVQWKKVCNVFDNFCHQ 163
L GN W C F FCH+
Sbjct: 134 LYLAEKGNMATAWSSACRSFGPFCHK 159