Miyakogusa Predicted Gene

Lj4g3v2314740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2314740.1 tr|B9NAH1|B9NAH1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_828725 PE=4
SV=1,31.11,0.00000000000002,seg,NULL; coiled-coil,NULL,CUFF.50779.1
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g37670.1                                                       198   5e-51
Glyma17g02990.1                                                       151   7e-37

>Glyma07g37670.1 
          Length = 532

 Score =  198 bits (504), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 150/258 (58%), Gaps = 7/258 (2%)

Query: 1   MCLVGGFVFQTIYSVWILSNYVANEKEEELEVSGRGNRNYVFDGNGKTVPVTGGGNGFDV 60
           +  +G FV QTIY+VWI+  Y +N+K+ ELE+ GR NR    D    ++PV G  N F  
Sbjct: 115 LYFLGFFVLQTIYTVWIVGVYKSNQKDGELEIDGRENR----DEKTVSLPVNGASNAFLS 170

Query: 61  EHQXXXXXXXXXXXXXAREVRRXXXXXXXXXXXXXXXXXXX---XXXXNRFGIEKEIGAR 117
           E Q             ARE RR                          NR GIEKEIG R
Sbjct: 171 EEQLLMEKKIEEIKLMAREARRIESEKKGKEDEDEDFEVDDDEGAVSGNRLGIEKEIGER 230

Query: 118 LLKLKGRISDSDKDSSAALRGNARGNSAAGIARDGNKDVNQGNEALVFKKKFKYRSPSTK 177
           LL+L+ RI+ S KD SA L+ N RGNSAAG+ R  NKDVN+GNEALVFKKKFK++SPS K
Sbjct: 231 LLRLQNRINGSAKDISAGLQINIRGNSAAGVDRGVNKDVNKGNEALVFKKKFKFKSPSNK 290

Query: 178 VKKASKGFSGTRDGKASNTIKEGSAVKSITQDSGSDATDHEGVLCEDKQVNQQNVVTDKS 237
             K  KGF G RD   S   K GS  K   QD GSD +DH  +L EDK VNQQ+ VT KS
Sbjct: 291 ATKTPKGFPGNRDWNESKVKKRGSESKEAAQDYGSDVSDHAQMLHEDKPVNQQDAVTQKS 350

Query: 238 TSSVPLEESGKVVDNESR 255
            S+VP EE GK VD++S+
Sbjct: 351 VSNVPSEEGGKFVDDKSK 368


>Glyma17g02990.1 
          Length = 447

 Score =  151 bits (382), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/257 (43%), Positives = 135/257 (52%), Gaps = 47/257 (18%)

Query: 1   MCLVGGFVFQTIYSVWILSNYVANEKEEELEVSGRGNRNYVFDGNGKTV--PVTGGGNGF 58
           M  +G FV QTIY+VWI+  +  N+K+ +LE+          D + KTV  PV G  N F
Sbjct: 74  MYFLGFFVLQTIYTVWIVGIFKFNQKDRDLEI----------DRDEKTVSWPVHGASNVF 123

Query: 59  DVEHQXXXXXXXXXXXXXAREVRRXXXXXXXXXXXXXXXXXXXXXXXNRFGIEKEIGARL 118
             E Q             ARE RR                       NR GIEKEIG RL
Sbjct: 124 LSEEQVLMDKKIEEIKLMAREARRIESEKKGAVSS------------NRLGIEKEIGERL 171

Query: 119 LKLKGRISDSDKDSSAALRGNARGNSAAGIARDGNKDVNQGNEALVFKKKFKYRSPSTKV 178
           LK++ RI+ S KD SAAL+ N+RGNSAAG           GNEALVFKKKFK++SPSTK 
Sbjct: 172 LKVQNRINGSAKDISAALQINSRGNSAAG-----------GNEALVFKKKFKFKSPSTKD 220

Query: 179 KKASKGFSGTRDGKASNTIKEGSAVKSITQDSGSDATDHEGVLCEDKQVNQQNVVTDKST 238
            K  KGF G RD K S   K GS  K   QD G            +K+ NQ  +VT KS 
Sbjct: 221 TKTPKGFPGNRDWKESKATKRGSESKKAAQDHG------------NKRANQPELVTQKSV 268

Query: 239 SSVPLEESGKVVDNESR 255
           SSVP EE GKVVD++S+
Sbjct: 269 SSVPSEEGGKVVDDKSK 285