Miyakogusa Predicted Gene

Lj4g3v2312410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2312410.1 Non Chatacterized Hit- tr|K3ZUZ9|K3ZUZ9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si030430,56.25,0.000000000000001,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Myb_DNA-bind_4,NULL,CUFF.50754.1
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g17330.1                                                       149   9e-37
Glyma11g25570.1                                                       147   3e-36
Glyma13g26550.1                                                       130   3e-31
Glyma13g21370.1                                                        70   9e-13
Glyma10g07490.1                                                        69   1e-12
Glyma10g34520.1                                                        67   5e-12
Glyma08g05630.1                                                        62   2e-10
Glyma16g01370.1                                                        62   2e-10
Glyma07g04790.3                                                        61   4e-10
Glyma07g04790.2                                                        61   4e-10
Glyma07g04790.1                                                        61   4e-10
Glyma15g08890.1                                                        54   6e-08
Glyma13g36650.1                                                        53   9e-08
Glyma13g30280.1                                                        52   1e-07
Glyma09g38050.2                                                        48   3e-06
Glyma09g38050.1                                                        48   3e-06
Glyma12g33850.1                                                        48   3e-06

>Glyma04g17330.1 
          Length = 229

 Score =  149 bits (376), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 80/116 (68%), Positives = 87/116 (75%), Gaps = 5/116 (4%)

Query: 4   KVENQEHHHPASLLPNI-HSTITAKEE----SPRKAIXXXXXXXXXDRLKRDEWSEGAVC 58
           K ++   HHP+ LLP   HSTI   +E    SPRK           DRLKRDEWSEGAV 
Sbjct: 11  KQQDDSSHHPSLLLPKPNHSTINNIKEDHHQSPRKLAIGGGGGGSGDRLKRDEWSEGAVT 70

Query: 59  TLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNKIESMKKR 114
           TLLEAYEAKWV RNRAKLKG DWE+VAKHVS+RAN+TKSPKTQTQCKNKIESMKKR
Sbjct: 71  TLLEAYEAKWVHRNRAKLKGHDWEDVAKHVSARANSTKSPKTQTQCKNKIESMKKR 126


>Glyma11g25570.1 
          Length = 341

 Score =  147 bits (371), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/113 (66%), Positives = 84/113 (74%), Gaps = 9/113 (7%)

Query: 2   ENKVENQEHHHPASLLPNIHSTITAKEESPRKAIXXXXXXXXXDRLKRDEWSEGAVCTLL 61
           E + ++  HHHP+ LLPN + + T         I          RLKRDEWSEGAV TLL
Sbjct: 13  EKQQDDSSHHHPSLLLPNPNHSTT---------INNNTKEDHHHRLKRDEWSEGAVTTLL 63

Query: 62  EAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNKIESMKKR 114
           EAYEAKWVLRNRAKLKG DWE+VAKHVS+RAN+TKSPKTQTQCKNKIESMKKR
Sbjct: 64  EAYEAKWVLRNRAKLKGHDWEDVAKHVSARANSTKSPKTQTQCKNKIESMKKR 116


>Glyma13g26550.1 
          Length = 318

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query: 45  DRLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQC 104
           +R+KRDEWSEGAV TLLEAYEAKWVLRNRAKLKG DWE+VA+HVSSRAN TKSPKT TQC
Sbjct: 35  ERVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQC 94

Query: 105 KNKIESMKKR 114
           KNK+ESMKKR
Sbjct: 95  KNKVESMKKR 104


>Glyma13g21370.1 
          Length = 487

 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           R  R+EWS+ A+  LLEAY  K+   NR  L+G+DWEEVA  VS R  N    K+  QCK
Sbjct: 103 RKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQS--KSVEQCK 160

Query: 106 NKIESMKKR 114
           NK++++KKR
Sbjct: 161 NKVDNLKKR 169


>Glyma10g07490.1 
          Length = 497

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           R  R+EWS+ A+  LLEAY  K+   NR  L+G+DWEEVA  VS R  N    K+  QCK
Sbjct: 112 RKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQS--KSVEQCK 169

Query: 106 NKIESMKKR 114
           NK++++KKR
Sbjct: 170 NKVDNLKKR 178


>Glyma10g34520.1 
          Length = 457

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR-ANNTKSPKTQTQC 104
           R  R+EWS+ A+  LLEAY  K+   NR  L+G+DWEEVA+ V  R     K  K+  QC
Sbjct: 82  RKDREEWSDTAIAYLLEAYTEKFNQLNRGNLRGRDWEEVAEAVLERCGGEGKHQKSVEQC 141

Query: 105 KNKIESMKKR 114
           KNKI+++KKR
Sbjct: 142 KNKIDNLKKR 151


>Glyma08g05630.1 
          Length = 313

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 38/69 (55%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           RL    WS      L++AY  KW    R  LK   W+EVA  VSSR  N   PKT  QC+
Sbjct: 37  RLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVSSRCPNASPPKTPVQCR 96

Query: 106 NKIESMKKR 114
           +K+E ++KR
Sbjct: 97  HKMEKLRKR 105


>Glyma16g01370.1 
          Length = 370

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 45/64 (70%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSEGA   L++A+  +++  +R  LK + W+EVA+ VS R + TK+PKT  QCKN+
Sbjct: 73  REDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDFTKAPKTDIQCKNR 132

Query: 108 IESM 111
           I+++
Sbjct: 133 IDTV 136


>Glyma07g04790.3 
          Length = 368

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 44/64 (68%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSEGA   L++A+  +++  +R  LK + W+EVA  VS R + TK+PKT  QCKN+
Sbjct: 67  REDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNR 126

Query: 108 IESM 111
           I+++
Sbjct: 127 IDTV 130


>Glyma07g04790.2 
          Length = 368

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 44/64 (68%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSEGA   L++A+  +++  +R  LK + W+EVA  VS R + TK+PKT  QCKN+
Sbjct: 67  REDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNR 126

Query: 108 IESM 111
           I+++
Sbjct: 127 IDTV 130


>Glyma07g04790.1 
          Length = 368

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 44/64 (68%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSEGA   L++A+  +++  +R  LK + W+EVA  VS R + TK+PKT  QCKN+
Sbjct: 67  REDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNR 126

Query: 108 IESM 111
           I+++
Sbjct: 127 IDTV 130


>Glyma15g08890.1 
          Length = 201

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 47  LKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNT-KSPKTQTQCK 105
           ++ D WSE A  TL++A+  +++  NR  L+ +DW++VA  V++   +T K+ +T  QCK
Sbjct: 22  VREDCWSEEASATLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCK 81

Query: 106 NKIESMKKR 114
           N+I+++KK+
Sbjct: 82  NRIDTIKKK 90


>Glyma13g36650.1 
          Length = 306

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRAN--NTKSPKTQTQCK 105
           + D WSE A  TL+EA+  + +  NR  L+ + W+EVA  V++R    +TK+ +T  QCK
Sbjct: 26  REDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNARHGHVSTKARRTDVQCK 85

Query: 106 NKIESMKKRTCV 117
           N+I+++KK+  +
Sbjct: 86  NRIDTLKKKYKI 97


>Glyma13g30280.1 
          Length = 312

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 50  DEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNT-KSPKTQTQCKNKI 108
           D WSE A  TL++A+  +++  NR  L+ +DW++VA  V++   +T K+ +T  QCKN+I
Sbjct: 24  DCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRI 83

Query: 109 ESMKKRTCV 117
           +++KK+  +
Sbjct: 84  DTIKKKYKI 92


>Glyma09g38050.2 
          Length = 322

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR-ANNTKSPKTQTQC 104
           RL    W+      L++AY  KW    R  LK   W+EVA  V+++  N + + KT  QC
Sbjct: 30  RLPPPCWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADSVTAQCPNASPTAKTPVQC 89

Query: 105 KNKIESMKKR 114
           ++K+E ++KR
Sbjct: 90  RHKMEKLRKR 99


>Glyma09g38050.1 
          Length = 322

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR-ANNTKSPKTQTQC 104
           RL    W+      L++AY  KW    R  LK   W+EVA  V+++  N + + KT  QC
Sbjct: 30  RLPPPCWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADSVTAQCPNASPTAKTPVQC 89

Query: 105 KNKIESMKKR 114
           ++K+E ++KR
Sbjct: 90  RHKMEKLRKR 99


>Glyma12g33850.1 
          Length = 307

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRAN--NTKSPKTQTQCK 105
           + D WSE A  TL+EA+  + +  NR  L+ + W+EVA  V++     + K+ +T  QCK
Sbjct: 26  REDCWSEEATFTLIEAWGQRHLELNRGNLRQRHWQEVADAVNALHGHVSAKARRTDVQCK 85

Query: 106 NKIESMKKRTCV 117
           N+I+++KK+  +
Sbjct: 86  NRIDTLKKKYKI 97