Miyakogusa Predicted Gene

Lj4g3v2310320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2310320.1 Non Chatacterized Hit- tr|C5YFR4|C5YFR4_SORBI
Putative uncharacterized protein Sb06g015250
OS=Sorghu,44.44,7e-17,seg,NULL,CUFF.50745.1
         (453 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g03050.1                                                       274   2e-73
Glyma07g37600.1                                                       235   7e-62
Glyma15g16000.1                                                       155   1e-37
Glyma09g04850.1                                                       140   2e-33
Glyma14g16710.1                                                       103   5e-22

>Glyma17g03050.1 
          Length = 365

 Score =  274 bits (700), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 181/360 (50%), Positives = 195/360 (54%), Gaps = 54/360 (15%)

Query: 112 HNRHDYHSRRTRLPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKIILKRSKS 171
           H  H Y+ RRTRLPF                                   D I+LKRSKS
Sbjct: 40  HFNHPYYPRRTRLPFLLPKKKSKKPTSAPTS-------------------DNILLKRSKS 80

Query: 172 TATPRRRHSLIDAEDDTV-----DFSPRKRHGFWSFLYXXXXXXXXXXXXXXXXXXFRDS 226
           TATPRR  SL+D +D+        FSPRKR+GFWSFLY                  FRD+
Sbjct: 81  TATPRRNRSLVDDDDNDDDLVIGPFSPRKRNGFWSFLYLSSKSSKKLNSKS-----FRDN 135

Query: 227 NHGSTPNPRILAINXXXXXXXXXXXXKLKEKCCSGSSLGRKSDIVVEEDNNXXXX-XXXX 285
           N  +TP  RI +IN            KLKEKCCSGSSL  K+DIVVE+DNN         
Sbjct: 136 NINNTP--RISSINLAPASTSSA---KLKEKCCSGSSL--KTDIVVEQDNNNSNSPNTAS 188

Query: 286 XXXFERKVXXXXXXXXXXXXXXXDFFERISTGFGDCTLRRVESQREGKTK---------- 335
              FERKV               DFFERISTGFGDCTLRRVESQREGK K          
Sbjct: 189 ASSFERKVSRSKSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPKGTGGGASAAV 248

Query: 336 --TGENHHHNHRCMKERVRCGGLFSGFMMTXXXXXXXXXXXXXXXXADDAAAMNSGKSTA 393
              GE HHH+  C+KERVRCGGLFSGFMMT                ADDAAA+N GKS  
Sbjct: 249 SRAGEQHHHH--CIKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAVN-GKSAT 305

Query: 394 VALSHGGRGRSWGWAFASPMRAFXXXXXXXXXX-RDIIRDANDKNATPNLSAIPSLLAAR 452
           VALSH  RGRSWGWAFASPMRAF           RDIIRDANDKNATPNLSAIPSLLA R
Sbjct: 306 VALSH-NRGRSWGWAFASPMRAFSGKPSSKESNRRDIIRDANDKNATPNLSAIPSLLAVR 364



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 26/30 (86%), Gaps = 1/30 (3%)

Query: 20 MGDGMQCIDHPFRNNNPGGICALCLQEKLG 49
          MGDGMQC DHP+R NNPGGICA CLQ+KL 
Sbjct: 1  MGDGMQCSDHPYR-NNPGGICAFCLQDKLA 29


>Glyma07g37600.1 
          Length = 420

 Score =  235 bits (600), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 167/310 (53%), Positives = 176/310 (56%), Gaps = 35/310 (11%)

Query: 162 DKIILKRSKSTATPRRRHSLI-----DAEDDTVDFSPRKRHGFWSFLYXXXXXXXXXXXX 216
           D I+LKRSKSTATPRR HSL+     D E     FSPRKR+GFWSFLY            
Sbjct: 126 DNIVLKRSKSTATPRRNHSLVVDDDDDDEFAIGGFSPRKRNGFWSFLYLSSKSSKKLNSK 185

Query: 217 XXXXXXFRDSNHGSTPNPRILAINXXXXXXXXXXXXKLKEKCCSGSSLGRKSDIVVEEDN 276
                 FRD N      PRI  IN            KLK+K CSGSSL  K+DIVVE+DN
Sbjct: 186 S-----FRDHNP-----PRISTINSAPGSSSSV---KLKDKRCSGSSL--KTDIVVEQDN 230

Query: 277 -NXXXXXXXXXXXFERKVXXXXXXXXXXXXXXXDFFERISTGFGDCTLRRVESQREGKTK 335
            N           FERKV               DFFERISTGFGDCTLRRVESQREGK K
Sbjct: 231 TNSPNTASASASSFERKVSRSRSVGCGSRSFSGDFFERISTGFGDCTLRRVESQREGKPK 290

Query: 336 T----------GENHHHNHRCMKERVRCGGLFSGFMMTXXXXXXXXXXXXXXXXADDAAA 385
                      G  HHH+H CMKERVRCGGLFSGFMMT                ADDAAA
Sbjct: 291 GIGGGSSAVSRGGEHHHHHHCMKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAA 350

Query: 386 MN--SGKSTAVALSHGGRGRSWGWAFASPMRAFXXXXXXXXXX-RDIIRDANDKNATPNL 442
               +GKS  VALSH  RGRSWGWAFASPMRAF           RDIIR A+DKNATPNL
Sbjct: 351 AAAVNGKSATVALSH-NRGRSWGWAFASPMRAFSGKPSSKESNRRDIIRGASDKNATPNL 409

Query: 443 SAIPSLLAAR 452
           SAIPSLLA R
Sbjct: 410 SAIPSLLAVR 419



 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 35/47 (74%), Gaps = 1/47 (2%)

Query: 4  MEGIKXXXXXRVEDHDMGDGMQCIDHPFRNNNPGGICALCLQEKLGK 50
          ME +K       EDHDM DGMQC DHP+R NNPGGICA CLQ+KLGK
Sbjct: 1  MEAMKGARVGVGEDHDMPDGMQCSDHPYR-NNPGGICAFCLQDKLGK 46


>Glyma15g16000.1 
          Length = 337

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/293 (40%), Positives = 135/293 (46%), Gaps = 73/293 (24%)

Query: 164 IILKRSKSTATPRRRHSLIDAEDDTVDFSPRKRHGFWSFLYXXXXXXXXXXXXXXXXXXF 223
           II KRSKSTATP+R   L     +  DFSPRKR+GFWSFLY                   
Sbjct: 113 IIFKRSKSTATPKRNQFL-----EEKDFSPRKRNGFWSFLYPS----------------- 150

Query: 224 RDSNHGSTPNPRILAINXXXXXXXXXXXXKLKEKCCSGSSLGRKSD--IVVEEDNNXXXX 281
                 S+   +    N            K + KC     LG+KSD  I+VEED      
Sbjct: 151 ------SSKEAKSFGPNG-----------KYRGKC-----LGKKSDHVIIVEEDK----- 183

Query: 282 XXXXXXXFERKVXXXXXXXXXXXXXXXDFFERISTGFGDCTLRRVESQRE-GKTKTGENH 340
                     KV               DFFERIS+G GDCTLRRVESQRE GK K   + 
Sbjct: 184 CLSSSSSSSSKVSRSRSVGCGSRSFSSDFFERISSGLGDCTLRRVESQREGGKPKLAASA 243

Query: 341 HHNHRCMKERVRCGGLFSGFMMTXXXXXXXXXXXXXXXXADDAAAMNSGKSTAVALSHGG 400
           +  + CMKERVRCGG+FSGF+M                  D                  G
Sbjct: 244 NTMNHCMKERVRCGGIFSGFVMNSSSSTTSSSSWVSSSVDD------------------G 285

Query: 401 RGRSWGWAFASPMRAFXXXXXXXXXXRDIIRDANDK-NATPNLSAIPSLLAAR 452
           RGRSWGWAFASPMRAF              RDA+DK NATPNLSAIP+LL  R
Sbjct: 286 RGRSWGWAFASPMRAFTTKGSPPSSSSK--RDASDKNNATPNLSAIPTLLTVR 336


>Glyma09g04850.1 
          Length = 325

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/292 (40%), Positives = 140/292 (47%), Gaps = 82/292 (28%)

Query: 164 IILKRSKSTATPRRRHSLIDAEDDTVDFSPRKRHGFWSFLYXXXXXXXXXXXXXXXXXXF 223
           II KRSKSTATPRR ++    E+D   FSPRKR+GFWSFLY                   
Sbjct: 112 IIFKRSKSTATPRRNNNQFLEEED---FSPRKRNGFWSFLYPS----------------- 151

Query: 224 RDSNHGSTPNPRILAINXXXXXXXXXXXXKLKEKCCSGSSLGRKSD--IVVEEDNNXXXX 281
             S++G                       K ++KC     LG+KSD  IV+EED      
Sbjct: 152 --SSNG-----------------------KHRDKC-----LGKKSDHVIVMEEDT----- 176

Query: 282 XXXXXXXFERKVXXXXXXXXXXXXXXXDFFERISTGFGDCTLRRVESQREGKTKTGENHH 341
                     KV               DFF+RIS+G  DCTLRRVESQREG       + 
Sbjct: 177 ----CFSSSSKVSRSRSIGCGSRSFSGDFFDRISSGLSDCTLRRVESQREGGKPKVIANT 232

Query: 342 HNHRCMKERVRCGGLFSGFMMTXXXXXXXXXXXXXXXXADDAAAMNSGKSTAVALSHGGR 401
            NH CMKERVRCGG+FSGF+MT                   +++ +S  S   +    GR
Sbjct: 233 MNH-CMKERVRCGGIFSGFVMTSSSS------------TTSSSSSSSSSSWVSSSVDDGR 279

Query: 402 GRSWGWAFASPMRAFXXXXXXXXXXRDIIRDANDKNA-TPNLSAIPSLLAAR 452
           GRSWGWAFASPM+AF              RDA+DKN  T NLSAIPSLL  R
Sbjct: 280 GRSWGWAFASPMKAFTTKGSSK-------RDASDKNNDTHNLSAIPSLLTVR 324


>Glyma14g16710.1 
          Length = 206

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 91/213 (42%), Gaps = 52/213 (24%)

Query: 162 DKIILKRSKSTATPRRRHSLIDAEDDTV--DFSPRKRHGFWSFLYXXXXXXXXXXXXXXX 219
           D I+LK SKST T RR HSLI+ ++D V   FSP+KR+ F  F                 
Sbjct: 23  DNIVLKCSKSTTTLRRNHSLINNDNDLVIGGFSPKKRNIFLVF-----SLSLFQIIQKLN 77

Query: 220 XXXFRDSNHGSTPNPRILAINXXXXXXXXXXXXKLKEKCCSGSSLGRKSDIVVEEDNNXX 279
              FRD+N      PRI  IN                                   NN  
Sbjct: 78  SKSFRDNN-----TPRISTINS-------------------------------ASGNNTN 101

Query: 280 XXXXXXXXXFERKVXXXXXXXXXXXXXXXDFFERISTGFGDCTLRRVESQREGKTK---- 335
                    FE KV               DFF+RIST FGDCTLR VESQ EGK K    
Sbjct: 102 SPNTTSASSFECKVLRSRFVGCGSRSFSRDFFKRISTRFGDCTLRSVESQHEGKPKRTGG 161

Query: 336 -----TGENHHHNHRCMKERVRCGGLFSGFMMT 363
                + ++ HH+H CMKERV  G LFSGFMMT
Sbjct: 162 GSSAVSNDDEHHHHHCMKERVTYGRLFSGFMMT 194