Miyakogusa Predicted Gene

Lj4g3v2295560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295560.1 Non Chatacterized Hit- tr|I1L235|I1L235_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52830
PE,62.14,0.0000000000006,seg,NULL,
gene.Ljchr4_pseudomol_20120830.path1.gene6359.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g10520.1                                                        50   6e-07

>Glyma09g10520.1 
          Length = 337

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 12/82 (14%)

Query: 20  NTTPSTNNPQGDNEVKSQSQXXXXXXXXXXXXPAYRDSEHAFGGRNEDVVESDPPAAQPS 79
           NT PST NPQG++EVKSQSQ            PA+ + + AF   NE+  E DP AAQPS
Sbjct: 22  NTNPSTTNPQGNDEVKSQSQDEKGSDGGEGGSPAHGEHDPAF---NEEEEERDPSAAQPS 78

Query: 80  AAVAN---------DIKIDDEE 92
            A ++         D KID+ E
Sbjct: 79  HAASSSKDLEEAPGDAKIDETE 100