Miyakogusa Predicted Gene
- Lj4g3v2290280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2290280.1 Non Chatacterized Hit- tr|H3GI31|H3GI31_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,36.73,0.000000000000002,Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratr,CUFF.50708.1
(477 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g03210.1 369 e-102
Glyma07g37420.1 365 e-101
Glyma08g47150.1 71 3e-12
Glyma18g38350.1 64 5e-10
Glyma08g05870.2 59 2e-08
Glyma08g05870.1 59 2e-08
Glyma08g17950.1 55 2e-07
Glyma08g17950.2 54 3e-07
Glyma15g41110.1 54 3e-07
Glyma08g46090.2 53 7e-07
Glyma08g46090.1 53 7e-07
Glyma03g21690.1 53 9e-07
Glyma07g39430.1 52 1e-06
Glyma18g32830.1 50 4e-06
>Glyma17g03210.1
Length = 442
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/465 (48%), Positives = 252/465 (54%), Gaps = 39/465 (8%)
Query: 26 NFNFDFDLGIGSNRPKSLIDQKXXXXXXXXXXXXXXXXXXXXXQSKKPSWTHXXXXXXXX 85
NFNFDFDLGIGSNRPKSL DQK S +P+WTH
Sbjct: 4 NFNFDFDLGIGSNRPKSLNDQKNPKPTSSY-------------SSAQPAWTHRPAPTQTT 50
Query: 86 X---XXXSMAGDIFGKSWGSAQPSAPT--IGIVNKNPNLFGDLVXXXXXXXXXXXXXXTN 140
SM GDIFGKSWG+ QPS+ + IGIVNKNPNLFGDLV TN
Sbjct: 51 ALPGGPPSMVGDIFGKSWGTPQPSSASKNIGIVNKNPNLFGDLVSSALGLGSK-----TN 105
Query: 141 VPLKNAASTTKTTSFSMGNMANSLPKTGNAPQXXXXXXX--------XXXXXXXXXXXXX 192
VPLKNA + KTT+FSMGNMA+SLPKTG+ PQ
Sbjct: 106 VPLKNAPAPNKTTTFSMGNMADSLPKTGSTPQSSASWASSSGGFNVNANKTTPNLGGPSL 165
Query: 193 XXXXXXXXXXXXXXKDPFSSLGVGIGTXXXXXXXXXXXXXXXXXXIEKDDDGFGDFQNXX 252
KDPFSSL GIG+ ++ DDGFGDFQN
Sbjct: 166 RNMGSGIGTNSNTNKDPFSSL-SGIGSKQSSTLNSAAKGPK----VDLGDDGFGDFQNAS 220
Query: 253 XXXXXXXXXXXXXXXINFDFTGSTASSNRSPAQASGGGDPMDMFFTXXXXXXXXXXXXXX 312
I+ +FT STA++ S + GGGDPMDMFFT
Sbjct: 221 KPSSAAFPSTASPG-IDINFTRSTAAA-ASNQGSGGGGDPMDMFFTTISSSASGEGAAAA 278
Query: 313 XXXXXXEMDDWGMDSEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDNYKQGQFA 372
+ D+WG+DSEF MD+YKQGQFA
Sbjct: 279 SDGFGGQ-DNWGLDSEFGGGGQDVGGTTTELEGLPPPPAGVSGSTAKGKGMDSYKQGQFA 337
Query: 373 DAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENNETNVSVL 432
DAIKWLSWAV+LLEKAGD A + EVLS RASCYKEVGEYKKAVADCTK+LEN+ETNVSVL
Sbjct: 338 DAIKWLSWAVVLLEKAGDSATTGEVLSSRASCYKEVGEYKKAVADCTKVLENDETNVSVL 397
Query: 433 VQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMAD 477
VQRALLYESMEKY+LGAEDLR VLKIDP NR+AR T+HRL KMAD
Sbjct: 398 VQRALLYESMEKYRLGAEDLRTVLKIDPGNRIARGTVHRLAKMAD 442
>Glyma07g37420.1
Length = 478
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 248/466 (53%), Gaps = 37/466 (7%)
Query: 26 NFNFDFDLGIGSNRPKSLIDQKXXXXXXXXXXXXXXXXXXXXXQ-SKKPSWTHXXXXXXX 84
NFNFDFDLGIGSNRPKSL DQK Q +K+P+WTH
Sbjct: 36 NFNFDFDLGIGSNRPKSLNDQKNPKPTPYSSYSTTTTASYSSSQPNKQPAWTHQPSPTQT 95
Query: 85 XX---XXXSMAGDIFGKSWGSAQPSAPT--IGIVNKNPNLFGDLVXXXXXXXXXXXXXXT 139
SM GDIFGKSWG+ QPS+ + IGIVNKNPNLFGDLV T
Sbjct: 96 TALPGGPPSMVGDIFGKSWGTPQPSSASKNIGIVNKNPNLFGDLVSSALGQGSK-----T 150
Query: 140 NVPLKNAASTTKTTS-FSMGNMANSLPKTGNAPQXXXXXXX-------XXXXXXXXXXXX 191
NVPLKNA + S FSMGNMA+SLPKTG+ PQ
Sbjct: 151 NVPLKNAPTPAPNKSTFSMGNMADSLPKTGSTPQSSSTWASSSGGFNVSANKTTLNLGGP 210
Query: 192 XXXXXXXXXXXXXXXKDPFSSLGVGIGTXXXXXXXXXXXXXXXXXXIEKDDDGFGDFQNX 251
KDPFSSL GIG+ ++ DDGFGDFQN
Sbjct: 211 SLRNMGTGIGTNSNNKDPFSSLS-GIGSKQSATLNSAPKGPK----VDLGDDGFGDFQNA 265
Query: 252 XXXXXXXXXXXXXXXXINFDFTGSTASSNRSPAQASGGGDPMDMFFTXXXXXXXXXXXXX 311
I+ +FTGS S GDPMDMFFT
Sbjct: 266 SKPSSTAFPFTASPG-IDINFTGSGDS-----------GDPMDMFFTATSSSASGGGAAA 313
Query: 312 XXXXXXXEMDDWGMDSEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDNYKQGQF 371
+ DDWG+DSEF MDNYKQGQF
Sbjct: 314 ASDGFGTQ-DDWGLDSEFGGGGHDVGGTTTELEGLPPPPSGVSGSTAKGKGMDNYKQGQF 372
Query: 372 ADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENNETNVSV 431
ADAIKWLSWAVILL+KAGD A +VEVLSCRASCYKEVGEYKKAVADCTK+LEN+ETNVSV
Sbjct: 373 ADAIKWLSWAVILLQKAGDSAATVEVLSCRASCYKEVGEYKKAVADCTKVLENDETNVSV 432
Query: 432 LVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMAD 477
LVQRALLYESMEKY+LGAEDLR VLKIDP NR+ARST+HRL KMAD
Sbjct: 433 LVQRALLYESMEKYRLGAEDLRTVLKIDPGNRIARSTVHRLAKMAD 478
>Glyma08g47150.1
Length = 276
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKI 421
+ +G++ +A+ A L+ A D SVE+ S C R C+ ++ +Y + +CTK
Sbjct: 119 FVEGKYEEALLQYELA---LQVASDMPSSVEIRSICHSNRGVCFLKLEKYDNTIKECTKA 175
Query: 422 LENNETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
LE N V LV+R +E +E + +D++ +L+IDPSN AR TI RL +A
Sbjct: 176 LELNPVYVKALVRRGEAHEKLEHFDKAIDDMKKILEIDPSNDQARKTIRRLETLA 230
>Glyma18g38350.1
Length = 268
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKI 421
+ +G++ +A+ A L+ A D SVE+ S C R C+ ++G+Y + +CTK
Sbjct: 107 FVEGKYEEALLQYELA---LQAAPDMPSSVEIRSICHSNRGVCFLKLGKYDNTIKECTKA 163
Query: 422 LENNETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
LE N + LV+R +E +E ++ ++ +L+ID SN AR TI +L +A
Sbjct: 164 LELNPVYIKALVRRGEAHEKLEHFEEAIAGMKKILEIDLSNDQARKTIRQLEPLA 218
>Glyma08g05870.2
Length = 591
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
YK Q+ AI + + A+ L GD+A S RA Y +G Y +AV DCTK + +
Sbjct: 486 YKDKQWQKAIGFYTEAIKL---CGDNA---TYYSNRAQAYLGLGSYLQAVEDCTKAISLD 539
Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKM 475
+ NV +R E + YK +D ++ L ++P+N+ A S RL K+
Sbjct: 540 KKNVKAYFRRGTAREMLGYYKEAIDDFKHALVLEPTNKRAASAAERLRKL 589
>Glyma08g05870.1
Length = 591
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
YK Q+ AI + + A+ L GD+A S RA Y +G Y +AV DCTK + +
Sbjct: 486 YKDKQWQKAIGFYTEAIKL---CGDNA---TYYSNRAQAYLGLGSYLQAVEDCTKAISLD 539
Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKM 475
+ NV +R E + YK +D ++ L ++P+N+ A S RL K+
Sbjct: 540 KKNVKAYFRRGTAREMLGYYKEAIDDFKHALVLEPTNKRAASAAERLRKL 589
>Glyma08g17950.1
Length = 281
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
Y+ G++ +A+ + + A+ + A + + + S RA+CY ++ ++KKA +CT +LE +
Sbjct: 14 YRDGRYEEALGFYTEAIAM---AKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELD 70
Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRL 472
+ L+ RA ++++Y D+ +L+++PS+ V ++ RL
Sbjct: 71 HKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARL 117
>Glyma08g17950.2
Length = 145
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
Y+ G++ +A+ + + A+ + A + + + S RA+CY ++ ++KKA +CT +LE +
Sbjct: 14 YRDGRYEEALGFYTEAIAM---AKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELD 70
Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRL 472
+ L+ RA ++++Y D+ +L+++PS+ V ++ RL
Sbjct: 71 HKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARL 117
>Glyma15g41110.1
Length = 280
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
Y+ G + +A+ + + A+ L A + + + S RA+CY ++ ++KKA +CT +LE +
Sbjct: 14 YRDGSYEEALGFYTEAIAL---AKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELD 70
Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRL 472
+ L+ RA ++++Y D+ +L+++PS+ V ++ RL
Sbjct: 71 HKHSGALMLRAQTLVTLKEYHSALFDVSRLLELNPSSEVYQNLQARL 117
>Glyma08g46090.2
Length = 544
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 370 QFADAIKWLSWAVILLEKAGDDAGSVEVLSCR---ASCYKEVGEYKKAVADCTKILENNE 426
++ A+K++ + E+ A +++V +C A+C ++ +YK+A CTK+L+
Sbjct: 413 RYEKAVKYIEYDSSFGEEEKKQAKTLKV-ACNLNNAACKLKLKDYKEAEKLCTKVLDLES 471
Query: 427 TNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
TNV L +RA Y + L D++ L+IDP+NR
Sbjct: 472 TNVKALYRRAQAYMQLTDLDLAELDIKKALEIDPNNR 508
>Glyma08g46090.1
Length = 544
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 370 QFADAIKWLSWAVILLEKAGDDAGSVEVLSCR---ASCYKEVGEYKKAVADCTKILENNE 426
++ A+K++ + E+ A +++V +C A+C ++ +YK+A CTK+L+
Sbjct: 413 RYEKAVKYIEYDSSFGEEEKKQAKTLKV-ACNLNNAACKLKLKDYKEAEKLCTKVLDLES 471
Query: 427 TNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
TNV L +RA Y + L D++ L+IDP+NR
Sbjct: 472 TNVKALYRRAQAYMQLTDLDLAELDIKKALEIDPNNR 508
>Glyma03g21690.1
Length = 582
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 370 QFADAIKWLSWAVILLEKAGDDAGSVEVLSCR---ASCYKEVGEYKKAVADCTKILENNE 426
++ A+K++ + E+ + +++V +C A+C ++ +YK+A CTK+L+
Sbjct: 431 RYEKAVKFIEYDTAFSEEEKKSSKALKV-ACNLNNAACKLKLKDYKQAEKLCTKVLDLES 489
Query: 427 TNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
TNV L +RA Y + L D++ L+IDP+NR
Sbjct: 490 TNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNR 526
>Glyma07g39430.1
Length = 727
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 365 NYKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVG--EYKKAVADCTKIL 422
++ +A A++ A+ L K D S RA+C ++ +Y+ +A+CT L
Sbjct: 52 RFQNKDYAGALEQYESALRLTPKTHPDRAVFH--SNRAACLMQMKPIDYEAVIAECTMAL 109
Query: 423 ENNETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRL 472
+ V L++RA +E++ KY++ +D++ +L DPSNR A RL
Sbjct: 110 QVQPRFVRALLRRARAFEALGKYEMSVQDVQFLLAADPSNRDALEIAQRL 159
>Glyma18g32830.1
Length = 544
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 370 QFADAIKWLSWAVILLEKAGDDAGSVEVLSCR---ASCYKEVGEYKKAVADCTKILENNE 426
++ A+K++ + E+ A +++V +C A+C ++ +YK+A CTK+L+
Sbjct: 413 RYEKAVKYIEYDSSFGEEEKKQAKTLKV-ACNLNNAACKLKLKDYKEAEKLCTKVLDLES 471
Query: 427 TNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
TNV L +RA + + L D++ L IDP+NR
Sbjct: 472 TNVKALYRRAQAHMQLTNLDLAELDIKKALDIDPNNR 508