Miyakogusa Predicted Gene
- Lj4g3v2267630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2267630.1 Non Chatacterized Hit- tr|C6T222|C6T222_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,67.65,0.0006,seg,NULL,CUFF.50666.1
(86 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g03590.1 114 3e-26
Glyma07g36970.1 113 5e-26
Glyma07g36980.1 48 2e-06
>Glyma17g03590.1
Length = 85
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 1 MADLQQKLDALKGLVGVLNSMDDAGETQNAXXXXXXXXXXXXXXGRNRFSGKYNNMATQT 60
MADLQQKLDALKGLVGVLNSMD+ GET N GRN GKYNN TQ
Sbjct: 1 MADLQQKLDALKGLVGVLNSMDE-GETHNNATSPNNPHNPTPMPGRNHSIGKYNNSGTQK 59
Query: 61 IKGLSNQTGFTEGNANGAINFGNLHA 86
IKGLSNQTGFTEGNANGAINFG+LHA
Sbjct: 60 IKGLSNQTGFTEGNANGAINFGSLHA 85
>Glyma07g36970.1
Length = 87
Score = 113 bits (282), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Query: 1 MADLQQKLDALKGLVGVLNSMDDAGETQN--AXXXXXXXXXXXXXXGRNRFSGKYNNMAT 58
MADLQ+KLDALKGLVGVLN+MD+ GET N A GRNR GKYNN T
Sbjct: 1 MADLQEKLDALKGLVGVLNNMDE-GETHNNNATSSPNNSHSPAPMPGRNRSVGKYNNSGT 59
Query: 59 QTIKGLSNQTGFTEGNANGAINFGNLHA 86
Q IKGLSNQTGFTEGNANGAINFGNLHA
Sbjct: 60 QKIKGLSNQTGFTEGNANGAINFGNLHA 87
>Glyma07g36980.1
Length = 93
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 53 YNNMATQTIKGLSNQTGFTEGNANGAINFGNLHA 86
Y N A Q IKGL+NQTG+ +GNANG INFG L A
Sbjct: 53 YLNSAKQDIKGLTNQTGYVKGNANGVINFGTLTA 86