Miyakogusa Predicted Gene

Lj4g3v2267350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2267350.1 CUFF.50646.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15050.1                                                       177   6e-45
Glyma15g33980.1                                                        50   9e-07
Glyma09g13570.1                                                        49   3e-06

>Glyma15g15050.1 
          Length = 564

 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 122/164 (74%), Gaps = 3/164 (1%)

Query: 1   MDQGFTKKRT-ALLAFDDSHNNKTIKFDISKSVCENENQKWLENLPNKGQKESLDIEEGE 59
           ++QG  KKR  A + FD+S+ N T KFD  K     +++KW++NL ++ QKES DIEEG+
Sbjct: 399 VNQGIAKKRKRASVGFDESNKN-TFKFDSPKYESNLKSKKWVQNLQDQAQKESSDIEEGQ 457

Query: 60  IVTEEPHMEP-SVSRRDGSEGAALTDNTVKKRKSQNGYNSELHTGNIASQKILDTLAKME 118
           IV EEP+ME  SVSRRD SEG A+TD+  KKR SQN  +S+ + G   SQ+ILD+LAKME
Sbjct: 458 IVAEEPYMEKVSVSRRDASEGPAVTDSVNKKRMSQNENSSDQYIGGYDSQRILDSLAKME 517

Query: 119 KRGERFKQPMNMIKEAEKTLKLNADTAVNMSEIKQHRPARKRRW 162
           KR ERFKQPM M KEAE++LKLN D+ V+  E+KQHRP RKRRW
Sbjct: 518 KRRERFKQPMTMKKEAEESLKLNNDSIVDTGEMKQHRPTRKRRW 561


>Glyma15g33980.1 
          Length = 1137

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 8/60 (13%)

Query: 111  LDTLAKMEKRGERFKQPMNMIKEAEKTLKLNADT--------AVNMSEIKQHRPARKRRW 162
            LDT+ +++KR ERFK PM   KEA    KL ++          V  SE+KQ RPARKRRW
Sbjct: 1075 LDTVERLKKRSERFKLPMPSEKEALVIKKLESEPLPSAKSENPVVDSEVKQERPARKRRW 1134


>Glyma09g13570.1 
          Length = 1282

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 8/60 (13%)

Query: 111  LDTLAKMEKRGERFKQPMN------MIK--EAEKTLKLNADTAVNMSEIKQHRPARKRRW 162
            LDT+ +++KR ERFK PM       +IK  E+E      ++  V  SE+KQ RPARKRRW
Sbjct: 1220 LDTVERLKKRSERFKLPMPSEKETLVIKKLESEPLPSAKSENPVVDSEVKQERPARKRRW 1279