Miyakogusa Predicted Gene

Lj4g3v2263890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2263890.1 tr|G7IEN9|G7IEN9_MEDTR GPN-loop GTPase
OS=Medicago truncatula GN=MTR_1g100240 PE=4
SV=1,83.33,0,coiled-coil,NULL; no description,NULL;
ATP_bind_1,Uncharacterised protein family, ATP binding;
P-loo,CUFF.50618.1
         (401 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g36620.1                                                       613   e-176
Glyma17g03980.1                                                       602   e-172
Glyma06g04970.1                                                        91   2e-18
Glyma04g04870.1                                                        91   3e-18
Glyma08g39880.2                                                        90   4e-18
Glyma08g39880.1                                                        90   4e-18

>Glyma07g36620.1 
          Length = 405

 Score =  613 bits (1582), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 302/357 (84%), Positives = 320/357 (89%), Gaps = 3/357 (0%)

Query: 1   MDADDGAKNANLDDAPMQMDSGDSSSTAQVKDKEKEELTETMNKLHIEGSSSGSGLPNFK 60
           MDA +G+ +A LD+ P QMDS    S AQ KDKEKEELTE MNKLHIEGSSSGSG  N +
Sbjct: 1   MDAGNGSGDAKLDNTPTQMDS---DSGAQAKDKEKEELTENMNKLHIEGSSSGSGSSNIR 57

Query: 61  RKPVIILVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKY 120
           RKPVIILVVGMAGSGKTT MHRLVCHTHL  +RGYV+NLDPAVMTLPYAANID+RDTVKY
Sbjct: 58  RKPVIILVVGMAGSGKTTLMHRLVCHTHLKDIRGYVMNLDPAVMTLPYAANIDVRDTVKY 117

Query: 121 KEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEIFTWSASG 180
           KEVMKQFNLGPNGGILTSLNLFATKFDEV+SVIE+RADQLDYVLVDTPGQIEIFTWSASG
Sbjct: 118 KEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASG 177

Query: 181 AIITEAFASTFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQH 240
           AIITEAFASTFPTVV YVVDTPRS++PTTFMSNMLYACSILYKTRLPLIL FNKVDVA H
Sbjct: 178 AIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAH 237

Query: 241 QFAVEWMEDFEVFQQAAGSDHSYSSTFAQSLSLALDEFYKNLRSVGVSAVSGTGIEAFFK 300
           QFA+EWMEDFE FQ AA SD SY+ST  QSLSL LDEFY NL+SVGVSAVSG G+EAFF 
Sbjct: 238 QFALEWMEDFEAFQTAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFN 297

Query: 301 TVETSAEEYMENYKADLDKRREEKQRLEEGRRKESMDKLRMDMEKSGGGTVVLNTGL 357
            VE SAEEYME YKADLDKRREEKQRLEE RR+ESMDKLR DMEKSGG TVVL+TGL
Sbjct: 298 AVEASAEEYMETYKADLDKRREEKQRLEEDRRRESMDKLRRDMEKSGGETVVLSTGL 354


>Glyma17g03980.1 
          Length = 394

 Score =  602 bits (1553), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 297/357 (83%), Positives = 316/357 (88%), Gaps = 13/357 (3%)

Query: 1   MDADDGAKNANLDDAPMQMDSGDSSSTAQVKDKEKEELTETMNKLHIEGSSSGSGLPNFK 60
           M+AD+G+++A LD+                KDKEKEELTE MNKLHIEGSSSGSG  +F+
Sbjct: 1   MNADNGSRDAKLDNQ-------------HAKDKEKEELTENMNKLHIEGSSSGSGSSSFR 47

Query: 61  RKPVIILVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKY 120
           RKPVII+VVGMAGSGKTT MHRLVCHTHL  +RGYVVNLDPAVMTLPYAANID+RDTVKY
Sbjct: 48  RKPVIIIVVGMAGSGKTTLMHRLVCHTHLKDIRGYVVNLDPAVMTLPYAANIDVRDTVKY 107

Query: 121 KEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEIFTWSASG 180
           KEVMKQFNLGPNGGILTSLNLFATKFDEV+SVIE+RADQLDYVLVDTPGQIEIFTWSASG
Sbjct: 108 KEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASG 167

Query: 181 AIITEAFASTFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQH 240
           AIITEAFASTFPTVV YVVDTPRS++PTTFMSNMLYACSILYKTRLPLIL FNKVDVA H
Sbjct: 168 AIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAH 227

Query: 241 QFAVEWMEDFEVFQQAAGSDHSYSSTFAQSLSLALDEFYKNLRSVGVSAVSGTGIEAFFK 300
           QFA+EWMEDFE FQ AA SDHSYSST  QSLSL LDEFY NL+SVGVSAVSG G+EAFF 
Sbjct: 228 QFALEWMEDFEAFQTAASSDHSYSSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFN 287

Query: 301 TVETSAEEYMENYKADLDKRREEKQRLEEGRRKESMDKLRMDMEKSGGGTVVLNTGL 357
            VE SAEEYME YKADLDKRREEKQRLEE RRKESMDKLR DMEKSGG TVVL+TGL
Sbjct: 288 AVEASAEEYMETYKADLDKRREEKQRLEEDRRKESMDKLRRDMEKSGGETVVLSTGL 344


>Glyma06g04970.1 
          Length = 311

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 67  LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 126
           +VVG  GSGKTT+ + +     L   +  V+NLDPA  +LPY   ++I D VK  +VM +
Sbjct: 11  IVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYDCAVNIEDLVKLSDVMVE 70

Query: 127 FNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEIFTW--SASGAIIT 184
            +LGPNGG++  ++      D + + +E       Y+L D PGQ+E+F    SA   I+ 
Sbjct: 71  HSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKD-HYLLFDFPGQVELFFLHSSAKNVILK 129

Query: 185 EAFASTFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 244
                       +++D     +P  ++S +L + S +    LP I   +K+D+ +    +
Sbjct: 130 LIKKLNLRLTAVHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGKL 189

Query: 245 EWMEDF 250
            +  DF
Sbjct: 190 AFNLDF 195


>Glyma04g04870.1 
          Length = 301

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 67  LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 126
           +VVG  GSGKTT+ + +     L   +  V+NLDPA  +LPY   ++I D VK  +VM +
Sbjct: 6   VVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVE 65

Query: 127 FNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEIFTW--SASGAIIT 184
            +LGPNGG++  ++      D + + +E       Y+L D PGQ+E+F    SA   I+ 
Sbjct: 66  HSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKD-HYLLFDFPGQVELFFLHSSAKNVILK 124

Query: 185 EAFASTFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 244
                       +++D     +P  ++S ++ + S +    LP I   +K+D+ +    +
Sbjct: 125 LIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIESYGKL 184

Query: 245 EWMEDF 250
            +  DF
Sbjct: 185 AFNLDF 190


>Glyma08g39880.2 
          Length = 267

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 6/186 (3%)

Query: 67  LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 126
           LV+G AGSGK+T+   L  H   +    +VVNLDPA     Y   +DIR+ +   +VM++
Sbjct: 6   LVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLDDVMEE 65

Query: 127 FNLGPNGGILTSLNLFATKFDE-VVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 185
             LGPNGG++  +       D+ +   ++   D  DY++ D PGQIE+++         E
Sbjct: 66  LGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDD-DYLVFDCPGQIELYSHVPVLKNFVE 124

Query: 186 AFA-STFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 244
                 F     Y++D+    + T F+S  +   S + +  LP +   +K+D+   +   
Sbjct: 125 HLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDLVTKK--- 181

Query: 245 EWMEDF 250
           + +EDF
Sbjct: 182 KDLEDF 187


>Glyma08g39880.1 
          Length = 267

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 6/186 (3%)

Query: 67  LVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQ 126
           LV+G AGSGK+T+   L  H   +    +VVNLDPA     Y   +DIR+ +   +VM++
Sbjct: 6   LVIGPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLDDVMEE 65

Query: 127 FNLGPNGGILTSLNLFATKFDE-VVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITE 185
             LGPNGG++  +       D+ +   ++   D  DY++ D PGQIE+++         E
Sbjct: 66  LGLGPNGGLVYCMEHLEDNLDDWLTEELDNYLDD-DYLVFDCPGQIELYSHVPVLKNFVE 124

Query: 186 AFA-STFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAV 244
                 F     Y++D+    + T F+S  +   S + +  LP +   +K+D+   +   
Sbjct: 125 HLKRKNFSVCAVYLLDSQFMTDVTKFISGCMACLSAMVQLELPHVNILSKMDLVTKK--- 181

Query: 245 EWMEDF 250
           + +EDF
Sbjct: 182 KDLEDF 187