Miyakogusa Predicted Gene

Lj4g3v2250350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250350.1 Non Chatacterized Hit- tr|K3Z4F0|K3Z4F0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021418,36.64,3e-17,seg,NULL,CUFF.50713.1
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04260.1                                                       128   1e-29

>Glyma17g04260.1 
          Length = 151

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 78/96 (81%), Gaps = 3/96 (3%)

Query: 39  PPYTTTFSRDVGDNVASSSGSKLRSFFIGMGFLPSLVDKVIEENGEGNSDTLLEILLR-S 97
           PPYT+ FS DVGDNVASSSG KLR+FFIGMGFLP LVDKVIEENGE NSDTLLE LLR S
Sbjct: 57  PPYTS-FSGDVGDNVASSSGGKLRAFFIGMGFLPCLVDKVIEENGEENSDTLLEALLRYS 115

Query: 98  ARKSNGDSSDFLEGSLNTSKGRRSAPSVCPAGHSKE 133
           A KSN DS D L  S NTS+G RSAP+  P GHSKE
Sbjct: 116 AHKSNCDSFDSLGVSHNTSRG-RSAPNFYPDGHSKE 150