Miyakogusa Predicted Gene

Lj4g3v2250180.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250180.2 Non Chatacterized Hit- tr|D7T677|D7T677_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.84,0.000000000000001,CG_1,CG-1 DNA-binding domain,CUFF.50566.2
         (210 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04310.1                                                       178   3e-45

>Glyma17g04310.1 
          Length = 969

 Score =  178 bits (452), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/211 (51%), Positives = 131/211 (62%), Gaps = 36/211 (17%)

Query: 4   EQLEHIVLVHYRKVKEGCKSGITKLPVVPVTLVGSSRSGSAPFSNKISSPTCVVQTSLTP 63
            QLEHIVLVHYR++KEGCKSGI+ LPVVPVTLVGSS++ S   S KI+SP  +VQTS T 
Sbjct: 137 RQLEHIVLVHYREIKEGCKSGISHLPVVPVTLVGSSQNTSVLSSTKINSPISLVQTSFTS 196

Query: 64  TANKDDLNGQASEYEEDNSLNGP----HAQPISNPMPHSAPQLADEATGLLRNPIMSSWT 119
           +ANK   NG+ASE+E+ NS NGP    HAQPISN + HSAP L  EA   L         
Sbjct: 197 SANKVYQNGRASEHEDVNSKNGPQASSHAQPISNYVLHSAPWLTHEAAATL--------- 247

Query: 120 SSLPNFSHGNGLSPLGLIQNSGLNTVCIHDKQLHVEGSIDGPEVDFTVLKLGNSRLDAVC 179
                              NS  NT+ +HD + HVE S    E D TV KL N+ LD+V 
Sbjct: 248 ------------------LNSSRNTINMHDGKHHVEAS----EADLTVRKLSNAGLDSVH 285

Query: 180 KMQDHMISKDRLITDVYIQPVTGASKTVNQV 210
           +MQD +I +DRLITD+ +QPV     TVNQV
Sbjct: 286 RMQDGVIFRDRLITDMCVQPVIDLP-TVNQV 315