Miyakogusa Predicted Gene

Lj4g3v2249070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2249070.1 tr|A6MZI1|A6MZI1_ORYSI Novel plant snare 11
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1,78.38,9e-18,Helical
region found in SNAREs,Target SNARE coiled-coil domain; Sec20,Sec20;
T_SNARE,Target SNARE co,CUFF.50565.1
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g18030.1                                                       484   e-137
Glyma17g04460.1                                                       483   e-137
Glyma17g04460.2                                                       404   e-113
Glyma17g15990.1                                                       318   4e-87
Glyma05g05720.1                                                       172   2e-43
Glyma05g05710.1                                                       144   1e-34
Glyma10g11440.1                                                       113   2e-25
Glyma05g05720.2                                                       104   9e-23

>Glyma13g18030.1 
          Length = 269

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 243/263 (92%), Positives = 254/263 (96%)

Query: 1   MATNLQMTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIK 60
           MA+NLQM+PQ+EQIHGEIRD+FRALANGFQKLDKIKD+NRQS QLEELT KMRECKRLIK
Sbjct: 1   MASNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIK 60

Query: 61  EFDREIKDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGA 120
           EFDREIKDEEGRNPPEV+KQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFD GAG 
Sbjct: 61  EFDREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGV 120

Query: 121 SEPTAEENVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQT 180
           S PTAEENVQLASEMSNQEL+NAG KTMDETDQAIERSKQVVHQT+EVGTQTA TLKGQT
Sbjct: 121 SVPTAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQT 180

Query: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNPN 240
           EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGV+AIIVVKIV+PN
Sbjct: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVHPN 240

Query: 241 NKDIKDIPGLAPPAPTRRLLYVR 263
           NKDI+DIPGLAPP PTRRLLY R
Sbjct: 241 NKDIRDIPGLAPPVPTRRLLYAR 263


>Glyma17g04460.1 
          Length = 269

 Score =  483 bits (1243), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/263 (92%), Positives = 254/263 (96%)

Query: 1   MATNLQMTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIK 60
           MA+NLQM+PQ+EQIHGEIRD+FRALANGFQKLDKIKD+NRQS QLEELT KMRECKRLIK
Sbjct: 1   MASNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIK 60

Query: 61  EFDREIKDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGA 120
           E+DREIKDEEGRNPPEV+KQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFD GAGA
Sbjct: 61  EYDREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGA 120

Query: 121 SEPTAEENVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQT 180
           S  TAEENVQLASEMSNQEL+NAG KTMDETDQAIERSKQVVHQT+EVGTQTA TLKGQT
Sbjct: 121 SVSTAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQT 180

Query: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNPN 240
           EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGV+AIIVVKIV+PN
Sbjct: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVHPN 240

Query: 241 NKDIKDIPGLAPPAPTRRLLYVR 263
           NKDI+DIPGLAPP PTRRLLY R
Sbjct: 241 NKDIRDIPGLAPPVPTRRLLYAR 263


>Glyma17g04460.2 
          Length = 238

 Score =  404 bits (1037), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/223 (89%), Positives = 210/223 (94%), Gaps = 3/223 (1%)

Query: 1   MATNLQMTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIK 60
           MA+NLQM+PQ+EQIHGEIRD+FRALANGFQKLDKIKD+NRQS QLEELT KMRECKRLIK
Sbjct: 1   MASNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIK 60

Query: 61  EFDREIKDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGA 120
           E+DREIKDEEGRNPPEV+KQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFD GAGA
Sbjct: 61  EYDREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGA 120

Query: 121 SEPTAEENVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQT 180
           S  TAEENVQLASEMSNQEL+NAG KTMDETDQAIERSKQVVHQT+EVGTQTA TLKGQT
Sbjct: 121 SVSTAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQT 180

Query: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDK---CIMLF 220
           EQMGRIVNELDSIQFSIKKASQLVKEIGRQVA+     CI+ F
Sbjct: 181 EQMGRIVNELDSIQFSIKKASQLVKEIGRQVASFSLLPCIIYF 223


>Glyma17g15990.1 
          Length = 261

 Score =  318 bits (815), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 169/255 (66%), Positives = 204/255 (80%), Gaps = 3/255 (1%)

Query: 7   MTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIKEFDREI 66
           ++  L +I G I D+FRAL+NGFQKL+KIKDSNRQS QLE+LT K+RECKRLIKEFD+E+
Sbjct: 7   ISEDLAEIDGHIADNFRALSNGFQKLEKIKDSNRQSRQLEDLTEKLRECKRLIKEFDKEV 66

Query: 67  KDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGASEPTAE 126
           K  E     E +K LN++KQSMIKELNSYVAL+K Y   I NK++ELF+   G +E  AE
Sbjct: 67  KTLESSFDRETNKMLNEKKQSMIKELNSYVALKKQYATNIENKRIELFE---GPNEGYAE 123

Query: 127 ENVQLASEMSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQTEQMGRI 186
           EN  LAS M+N++L++ G + M+ETDQAIER K+VV  T+ VGT TA  LK QTEQM R+
Sbjct: 124 ENGLLASSMTNEQLMDHGNRMMNETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRV 183

Query: 187 VNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNPNNKDIKD 246
           VNELDSI FSIKKAS+LVKEIGRQVATDKCIM  LFLIV GV+AII+VK+V+P NKDI+D
Sbjct: 184 VNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRD 243

Query: 247 IPGLAPPAPTRRLLY 261
           IPGLAPP   RRLL+
Sbjct: 244 IPGLAPPVQNRRLLW 258


>Glyma05g05720.1 
          Length = 180

 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 108/127 (85%)

Query: 135 MSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQTEQMGRIVNELDSIQ 194
           M+N++L++ G + MDETDQAIER K+VV  T+ VGT TA  LK QTEQM R+VNELDSI 
Sbjct: 51  MTNEQLMDHGNRMMDETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRVVNELDSIH 110

Query: 195 FSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAIIVVKIVNPNNKDIKDIPGLAPPA 254
           FS+KKAS+LVKEIGRQVATDKCIM  LFLIV GV+AII+VK+V+P+NKDI+DIPGLAPP 
Sbjct: 111 FSMKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPDNKDIRDIPGLAPPV 170

Query: 255 PTRRLLY 261
             RRLL+
Sbjct: 171 QNRRLLW 177


>Glyma05g05710.1 
          Length = 147

 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 3/127 (2%)

Query: 7   MTPQLEQIHGEIRDHFRALANGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIKEFDREI 66
           ++  L +I G I D+FRAL+NGFQKL+KIKDSNRQ+ QLE+LT K+RECKRLIKEFD+E+
Sbjct: 7   ISEDLAEIDGHIADNFRALSNGFQKLEKIKDSNRQTRQLEDLTEKLRECKRLIKEFDKEV 66

Query: 67  KDEEGRNPPEVSKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDTGAGASEPTAE 126
           K  E     E +K LN++KQSMIKELNSYV L+K Y   I NK++ELF+   G +E   E
Sbjct: 67  KTLENSFDRETNKMLNEKKQSMIKELNSYVGLKKQYATNIENKRIELFE---GPNEGYTE 123

Query: 127 ENVQLAS 133
           EN  LAS
Sbjct: 124 ENGLLAS 130


>Glyma10g11440.1 
          Length = 62

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/62 (88%), Positives = 59/62 (95%)

Query: 27 NGFQKLDKIKDSNRQSTQLEELTGKMRECKRLIKEFDREIKDEEGRNPPEVSKQLNDEKQ 86
          NGF++LDKIKDSNRQS QLEELT KMRECKRLIKEFDREIKDE+GRN PEV+KQLNDEKQ
Sbjct: 1  NGFERLDKIKDSNRQSKQLEELTDKMRECKRLIKEFDREIKDEDGRNLPEVNKQLNDEKQ 60

Query: 87 SM 88
          SM
Sbjct: 61 SM 62


>Glyma05g05720.2 
          Length = 126

 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 61/74 (82%)

Query: 135 MSNQELVNAGMKTMDETDQAIERSKQVVHQTVEVGTQTAGTLKGQTEQMGRIVNELDSIQ 194
           M+N++L++ G + MDETDQAIER K+VV  T+ VGT TA  LK QTEQM R+VNELDSI 
Sbjct: 51  MTNEQLMDHGNRMMDETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRVVNELDSIH 110

Query: 195 FSIKKASQLVKEIG 208
           FS+KKAS+LVKEIG
Sbjct: 111 FSMKKASKLVKEIG 124