Miyakogusa Predicted Gene

Lj4g3v2226760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2226760.1 Non Chatacterized Hit- tr|D7KRM4|D7KRM4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,67.69,2e-18,seg,NULL; MOZART1,Protein of unknown function
DUF3743,CUFF.50545.1
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g12150.3                                                       116   6e-27
Glyma03g12150.2                                                       116   6e-27
Glyma03g12150.1                                                       116   6e-27
Glyma01g24550.1                                                       115   1e-26
Glyma18g13160.1                                                        55   2e-08

>Glyma03g12150.3 
          Length = 73

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 57/59 (96%)

Query: 1  MDPEAARIARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAVVVKELRKEK 59
          MDPEAAR ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKELRKEK
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEK 59


>Glyma03g12150.2 
          Length = 73

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 57/59 (96%)

Query: 1  MDPEAARIARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAVVVKELRKEK 59
          MDPEAAR ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKELRKEK
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEK 59


>Glyma03g12150.1 
          Length = 73

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 57/59 (96%)

Query: 1  MDPEAARIARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAVVVKELRKEK 59
          MDPEAAR ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKELRKEK
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEK 59


>Glyma01g24550.1 
          Length = 74

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 57/59 (96%)

Query: 1  MDPEAARIARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAVVVKELRKEK 59
          MDPEAAR ARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALA VVKELRKEK
Sbjct: 1  MDPEAARTARESLDLAFHMSNILDTGLDRHTLSVLIALCDLGVNPEALAAVVKELRKEK 59


>Glyma18g13160.1 
          Length = 164

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 2/46 (4%)

Query: 16 AFHM-SNILDTGLDRHTLSVLIALCDLGVNPEA-LAVVVKELRKEK 59
           F M +NILDT LD HTLSVLIALC+L   P+  LAVVVKELRKE+
Sbjct: 21 CFQMKTNILDTCLDHHTLSVLIALCNLESIPKHLLAVVVKELRKER 66