Miyakogusa Predicted Gene
- Lj4g3v2225720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2225720.1 Non Chatacterized Hit- tr|I1LDZ3|I1LDZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8429 PE=,75.38,2e-18,no
description,Nucleic acid-binding, OB-fold; no description,NULL;
Nucleic acid-binding proteins,Nuc,CUFF.50540.1
(403 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g38830.1 99 9e-21
Glyma15g19090.1 74 3e-13
Glyma08g25150.1 67 4e-11
Glyma15g31750.1 64 3e-10
Glyma17g04980.1 63 6e-10
Glyma13g17530.1 63 7e-10
Glyma08g25170.1 63 7e-10
Glyma09g34670.1 50 3e-06
>Glyma10g38830.1
Length = 335
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 55/65 (84%)
Query: 58 SAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVYMTN 117
+AK SEEPFRLLIVDSVIALFRVDFSGRGELA+RQQ L + L+KI +FNVAVYMTN
Sbjct: 215 AAKMSEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTN 274
Query: 118 QVIVE 122
QVI +
Sbjct: 275 QVISD 279
>Glyma15g19090.1
Length = 637
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 1 MLATQLNDQLRAGLVKRGSVVQLIEYICSPIQNRKIIVALNMETELSSIAIL 52
MLATQLND++R G V++GSVVQL++YIC+P++NRKIIV LNMET + I+
Sbjct: 59 MLATQLNDRVRTGRVQKGSVVQLLDYICTPLKNRKIIVILNMETIMDEFEII 110
>Glyma08g25150.1
Length = 424
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 191 AELESYMN-------TLVECYGFDLRNIVILLPNEKGYTQPQKEIVRSEVKSLIQESNEG 243
AEL+ +N L++ YGF +I +L+ ++ YT+P + +RS + LI+ + G
Sbjct: 17 AELKGCINDVWRMHRCLIDRYGFSEDDITVLIDTDESYTEPTGKNIRSALTRLIRSARPG 76
Query: 244 DILLLHISAHVTLKYPGMVG-------IPLLQTGDRQFIHADFWDKMVQCVHHRRAKLTV 296
D+L +H S H T + P G + D I D + + V V R KLT+
Sbjct: 77 DVLFVHYSGHGT-RLPAETGEDDDTGFDECIVPSDMNLITDDDFREFVDGV-PRECKLTI 134
Query: 297 TLETCHAGALFNSARQQ 313
++CH+G L + A++Q
Sbjct: 135 VSDSCHSGGLIDGAKEQ 151
>Glyma15g31750.1
Length = 415
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 200 LVECYGFDLRNIVILLPNEKGYTQPQKEIVRSEVKSLIQESNEGDILLLHISAHVTLKYP 259
L+E YGF +I +L+ ++ YT+P + +RS + L++ + GD+L +H S H T + P
Sbjct: 33 LIERYGFSEDDITVLIDTDESYTEPTGKNIRSALTRLVRSAEPGDVLFVHYSGHGT-RLP 91
Query: 260 GMVG-------IPLLQTGDRQFIHADFWDKMVQCVHHRRAKLTVTLETCHAGALFNSARQ 312
G + D I D + + V V R ++T+ ++CH+G L A++
Sbjct: 92 AETGEDDDTGYDECIVPSDMNLITDDDFREFVDGV-PRGCRITIVSDSCHSGGLLEEAKE 150
Query: 313 Q 313
Q
Sbjct: 151 Q 151
>Glyma17g04980.1
Length = 343
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 55 MESSAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVY 114
+E+++ E F ++IVDS AL+R DFSGRGEL+ RQ +L + L K+ +F VA+
Sbjct: 209 LEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIV 268
Query: 115 MTNQVI 120
+TNQV+
Sbjct: 269 ITNQVV 274
>Glyma13g17530.1
Length = 344
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 55 MESSAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVY 114
+E+++ E F ++IVDS AL+R DFSGRGEL+ RQ +L + L K+ +F VA+
Sbjct: 210 LEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIV 269
Query: 115 MTNQVI 120
+TNQV+
Sbjct: 270 ITNQVV 275
>Glyma08g25170.1
Length = 415
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 16/137 (11%)
Query: 191 AELESYMNT-------LVECYGFDLRNIVILLPNEKGYTQPQKEIVRSEVKSLIQESNEG 243
AEL+ +N L++ YGF +I +L+ ++ YT+P + +RS + L++ + G
Sbjct: 17 AELKGCINDVRRMQRCLIDRYGFSEDDITVLIDTDESYTEPTGKNIRSALTRLVRSAKPG 76
Query: 244 DILLLHISAHVTLKYPGMVG-------IPLLQTGDRQFIHADFWDKMVQCVHHRRAKLTV 296
DIL +H S H T + P G + D I D + + V V R +T+
Sbjct: 77 DILFVHYSGHGT-RLPAETGEDDDTGFDECIVPSDMNLITDDDFREFVDGV-PRGCTITI 134
Query: 297 TLETCHAGALFNSARQQ 313
++CH+G L A++Q
Sbjct: 135 VSDSCHSGGLLEEAKEQ 151
>Glyma09g34670.1
Length = 786
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 1 MLATQLNDQLRAGLVKRGSVVQLIEYICSPIQNRKIIVALNMETELSSIAIL 52
MLATQ ND + AG +++GSVV+L ++IC+ +Q+RKII+ ++++ L ++
Sbjct: 59 MLATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELI 110