Miyakogusa Predicted Gene

Lj4g3v2225710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2225710.1 tr|Q84MB9|Q84MB9_ARATH At1g48300 OS=Arabidopsis
thaliana PE=2 SV=1,46.6,1e-18,coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like ,CUFF.50542.1
         (334 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04650.1                                                       221   1e-57
Glyma13g17860.1                                                       202   5e-52

>Glyma17g04650.1 
          Length = 338

 Score =  221 bits (562), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/348 (40%), Positives = 173/348 (49%), Gaps = 38/348 (10%)

Query: 1   MDVSGTILRQLTYVTGAGTNAHSRGARVWAARPTARVVMGSGFSDEGHLQYYQDKKKGKP 60
           M++SGT+LRQ++YV+G GT+  SRG    A R   R+ MGSGF DEGHL+YYQD KK   
Sbjct: 1   MEISGTVLRQVSYVSGYGTHTRSRG---LAPRFGVRMGMGSGFCDEGHLRYYQDTKKVLT 57

Query: 61  VVLTAKNKVKLLKRVSKGMSLFDELGFALDPNQRALLNDLQTNLTSDSGEGXXXXXXXXX 120
                K      K            G A DP + A+  DLQ NLTSD+G+          
Sbjct: 58  PKKKLKLLKGFSKL-----------GLASDPEKLAMFYDLQQNLTSDAGDVLLRELEAAR 106

Query: 121 XXXXXXXXXXXXXXXXXXXXSKMKTGPDCXXXXXXXXXXXXXXXXXCDEVVDMNTFRXXX 180
                               +KM                       CD+VVDMNTFR   
Sbjct: 107 AKEKEVKKKRKQEKKAKLKAAKMNC-----ESSSSSSSESSDSDCGCDQVVDMNTFRAGV 161

Query: 181 XXXX------------------XXXXXXXXXXXXXXXXETIAXXXXXXXXXXXXLKNENH 222
                                                 E  +             KNE+ 
Sbjct: 162 GVGVGVGVGVVAPAPVEESPLPKTAPIVEDANAHCVAMELCSKNDIYVSSASNGFKNESA 221

Query: 223 GVSTAPQKRIEVCMGNKCKKSGAAALMQQFESXXXXXXXXXXXCKCMGKCKSAPNVRIQN 282
            V++APQKRIEVCMGNKCK+SGAAALMQ+FE            CKCMGKCK+APNV++QN
Sbjct: 222 VVTSAPQKRIEVCMGNKCKRSGAAALMQEFEKVVGVEGVAVVACKCMGKCKTAPNVKVQN 281

Query: 283 AVDH-ELAEGLNDSVKVPANPLCIGVGLEDVDAVVARFLGENYQDMGM 329
           +VDH  LA+GL+DSVK+PANPLCIGVGLEDVDA+VAR+  E++ D+GM
Sbjct: 282 SVDHNSLAQGLDDSVKIPANPLCIGVGLEDVDAIVARYFWESHTDIGM 329


>Glyma13g17860.1 
          Length = 294

 Score =  202 bits (513), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 152/306 (49%), Gaps = 28/306 (9%)

Query: 40  GSGFSDEGHLQYYQDKKKGKPVVLTAKNKVKLLKRVSKGMSLFDELGFALDPNQRALLND 99
           GSGF DEGHLQYYQD             K  L  +  K +  F +LG A DP + A+ +D
Sbjct: 4   GSGFCDEGHLQYYQD------------TKKILTPKKLKLLKGFSKLGLASDPEKLAMFHD 51

Query: 100 LQTNLTSDSGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKMKTGPDCXXXXXXXXXX 159
           LQ NLTSD+GE                              SKM                
Sbjct: 52  LQQNLTSDAGEVLLRELEAARAKEKEMKKKRKQEIKAKLKASKMNC-----ESSSSSSSE 106

Query: 160 XXXXXXXCDEVVDMNTFRXXXXXXXXXXXXXXXXXXXXXXXETIAXXX-----------X 208
                  CD+VVDMN FR                       +T A               
Sbjct: 107 SSDSDGDCDQVVDMNCFRAGAGVVVPAPVEESPLPKTPIVEDTNAKAHRDAMALCSKNDI 166

Query: 209 XXXXXXXXLKNENHGVSTAPQKRIEVCMGNKCKKSGAAALMQQFESXXXXXXXXXXXCKC 268
                   +K+E+  V+ APQKRIEVCMG KCK+SGAAALMQ+FE            CKC
Sbjct: 167 SVSSVRDCIKSESAVVTAAPQKRIEVCMGTKCKRSGAAALMQEFERVVGVEGGAVVSCKC 226

Query: 269 MGKCKSAPNVRIQNAVDHELAEGLNDSVKVPANPLCIGVGLEDVDAVVARFLGENYQDMG 328
           MGKCK+APNV++QN+VDH LA GL+DSV +PANPLCIGVGL DVDA+VARFLGE++ D+G
Sbjct: 227 MGKCKTAPNVKVQNSVDHSLARGLDDSVNIPANPLCIGVGLGDVDAIVARFLGESHTDIG 286

Query: 329 MVAATT 334
           M+ A T
Sbjct: 287 MIGAAT 292