Miyakogusa Predicted Gene

Lj4g3v2215590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215590.1 Non Chatacterized Hit- tr|B4FE34|B4FE34_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,75,9e-17,Tmemb_14,Uncharacterised protein family UPF0136,
Transmembrane; seg,NULL; TRANSMEMBRANE PROTEIN 14, ,CUFF.50538.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17660.1                                                       113   1e-25
Glyma17g04830.1                                                       108   6e-24

>Glyma13g17660.1 
          Length = 228

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 99/231 (42%), Gaps = 8/231 (3%)

Query: 1   MAEAVATFAISSSTSLPLRRTPIYSYRSQSSTLRFLPSRFPA--FGYSARSDRHVYAAVV 58
           MAE+V       S S  L R  I+S  S + +L    S FPA  FG   RS+ HV+AAV 
Sbjct: 1   MAESVGVAGFGVSGSFSLTRPTIFSRSSNNISLFRSQSHFPAAAFGSLTRSNPHVHAAV- 59

Query: 59  SSDSITA---PVITPELDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 115
           +SDS  A    +  P+LD +                                        
Sbjct: 60  TSDSKAATSLDLTQPDLDNSGGGANGNGGGGGGGGGGGGGGEGGGDNSKGEEGSDGDK-- 117

Query: 116 RKMGLSMSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVHTELPLRPVFX 175
           RKM L MSQK                                    YYV+TELP  PVF 
Sbjct: 118 RKMALLMSQKFTLAYAALVGVGGVMGYLKSGSNKSLLAGGLSASLLYYVYTELPGSPVFA 177

Query: 176 XXXXXXXXXXXXXVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 226
                        VMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH
Sbjct: 178 SSVGLGISAALLGVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 228


>Glyma17g04830.1 
          Length = 222

 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 102/232 (43%), Gaps = 16/232 (6%)

Query: 1   MAEAVATFAISSSTSLPLRRTPIYSYRSQSSTLRFL-PSRFPA--FGYSARSDRHVYAAV 57
           MAE +   ++S+  S  L R  I+ YRS  +   F   S FPA  FGY   S+ H+YAAV
Sbjct: 1   MAECLGV-SVSTLGSFSLSRPTIF-YRSPINISLFASQSHFPAAAFGYLTPSNPHLYAAV 58

Query: 58  VSSDSITA---PVITPELDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 114
            SSDS  A    +  P+LD +                                       
Sbjct: 59  -SSDSKAATSLDLTQPDLDNSGGGANGNANGGGGGGGGGGGDDSKGEEGSDGDK------ 111

Query: 115 XRKMGLSMSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVHTELPLRPVF 174
            RKM L MSQK                                    Y+V+TELP RPVF
Sbjct: 112 -RKMALLMSQKFTLAYAALVGVGGVMGYLKSGSNKSLLAGGLSASLLYFVYTELPGRPVF 170

Query: 175 XXXXXXXXXXXXXXVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 226
                         VMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH
Sbjct: 171 ASSVGLGISAALLGVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 222