Miyakogusa Predicted Gene

Lj4g3v2215570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215570.1 tr|G7JSE5|G7JSE5_MEDTR FYVE zinc finger family
protein OS=Medicago truncatula GN=MTR_4g036440 PE=4
S,69.33,2e-18,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; Ankyrin
repeat,Ankyrin repeat-containing domain; FY,CUFF.50528.1
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17630.1                                                       473   e-133
Glyma17g04870.1                                                       462   e-130
Glyma14g18530.1                                                        72   6e-13
Glyma14g18770.1                                                        66   4e-11
Glyma15g09490.2                                                        54   2e-07
Glyma15g09490.1                                                        54   3e-07
Glyma02g45770.1                                                        51   1e-06
Glyma04g02510.1                                                        51   1e-06
Glyma04g02510.2                                                        50   2e-06
Glyma14g03040.1                                                        49   4e-06
Glyma08g15940.1                                                        49   5e-06
Glyma13g29520.1                                                        49   5e-06
Glyma06g02550.1                                                        49   7e-06
Glyma07g05100.1                                                        49   8e-06
Glyma17g37890.1                                                        48   1e-05

>Glyma13g17630.1 
          Length = 291

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/284 (80%), Positives = 249/284 (87%), Gaps = 2/284 (0%)

Query: 5   PPPFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCF 64
           PPPFQEAARCVVC+CSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFG+YSNVRVCADCF
Sbjct: 7   PPPFQEAARCVVCNCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGIYSNVRVCADCF 66

Query: 65  NNSRS-QEVPHASSDGVNNITDTISKLDIDGNVDSKTLPSADNNPVSGIKECKCGMPLCI 123
           NNSRS ++ P  SSDGVN++TDTISKLDI+ NVDSK++P+A+N  V GIKECKCGMPLCI
Sbjct: 67  NNSRSGKDEPQTSSDGVNSVTDTISKLDINTNVDSKSIPTAENKLVLGIKECKCGMPLCI 126

Query: 124 CEAPAPSSDALPQQKKISPAMTASSNPKPRKTDTVXXXXXXXXXXXXXXPFNLGHVTNVA 183
           CEAP PSSDALPQQK  +P + A SNPK +KTDTV               FN+GHVTN  
Sbjct: 127 CEAPTPSSDALPQQKP-NPVIAAPSNPKSKKTDTVPKNRSSSSTSKFSSMFNVGHVTNGT 185

Query: 184 SARPQTDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIV 243
           S RPQ DYEV+GEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIV
Sbjct: 186 SDRPQIDYEVTGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIV 245

Query: 244 FILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGGVMDK 287
           FILMDSGASL+YKNAQGETP+DCAPATLQYKMRKKMEEGG +D+
Sbjct: 246 FILMDSGASLEYKNAQGETPIDCAPATLQYKMRKKMEEGGTVDQ 289


>Glyma17g04870.1 
          Length = 291

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/291 (77%), Positives = 249/291 (85%), Gaps = 4/291 (1%)

Query: 1   MSTE--PPPFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVR 58
           MST   PP FQEAARCVVC+CSFNTFRRRHHCRSCGRTLCNEHSS+QMALPQFGLYSNVR
Sbjct: 1   MSTAEAPPSFQEAARCVVCNCSFNTFRRRHHCRSCGRTLCNEHSSNQMALPQFGLYSNVR 60

Query: 59  VCADCFNNSRS-QEVPHASSDGVNNITDTISKLDIDGNVDSKTLPSADNNPVSGIKECKC 117
           VCADCFNN RS ++ P  SSDGVN++TDTISKLDI+ NVDSK++ +A+   +SGIKECKC
Sbjct: 61  VCADCFNNLRSGKDEPQTSSDGVNSVTDTISKLDINANVDSKSILTAETKLLSGIKECKC 120

Query: 118 GMPLCICEAPAPSSDALPQQKKISPAMTASSNPKPRKTDTVXXXXXXXXXXXXXXPFNLG 177
           GMPLCICEAP PSSDA PQQK  +P + A SNPKP+KTDTV               FN+G
Sbjct: 121 GMPLCICEAPTPSSDAFPQQKP-NPVIAAPSNPKPKKTDTVPKIRSSISTSKFSSMFNVG 179

Query: 178 HVTNVASARPQTDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVF 237
           HVTN  S RPQ DYEV+GEGLREAIKN D+AAVKKLLNEGVDANYRDKQGLSLLHLAAVF
Sbjct: 180 HVTNGTSDRPQIDYEVTGEGLREAIKNSDVAAVKKLLNEGVDANYRDKQGLSLLHLAAVF 239

Query: 238 NQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGGVMDKN 288
           NQTDIVFILMDSGASL+Y+NAQGETPLDCAPATLQYKMRKKMEEGG +D++
Sbjct: 240 NQTDIVFILMDSGASLEYRNAQGETPLDCAPATLQYKMRKKMEEGGAVDQS 290


>Glyma14g18530.1 
          Length = 62

 Score = 72.4 bits (176), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 8/64 (12%)

Query: 197 GLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLKYK 256
           GLREAIKNGDIAA+KKL NE V   +   +G+       +FNQ DIVFILMDSGASL+YK
Sbjct: 1   GLREAIKNGDIAAIKKLFNE-VFFFFFFWKGV-------LFNQIDIVFILMDSGASLEYK 52

Query: 257 NAQG 260
           N Q 
Sbjct: 53  NEQA 56


>Glyma14g18770.1 
          Length = 54

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 39/61 (63%), Gaps = 17/61 (27%)

Query: 197 GLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLKYK 256
           GLREAIKNGDIA +KKL NEGV                 +FNQ DIVFILMDSGASL+  
Sbjct: 1   GLREAIKNGDIATIKKLFNEGV-----------------LFNQIDIVFILMDSGASLELI 43

Query: 257 N 257
           N
Sbjct: 44  N 44


>Glyma15g09490.2 
          Length = 449

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 174 FNLGHVTNVASARPQTDYEVS--GEGLREAIK------NGDIAAVKKLLNEGVDANYRDK 225
           F LG  +++A  R   + E+   GE + + ++       GD+  +++ L  GV  NY+D 
Sbjct: 9   FTLGKQSSLAPERHNKEAELQKDGEAVDQGVRLMYSAFEGDVDGIREALESGVSVNYKDI 68

Query: 226 QGLSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGG 283
              + LH+AA    TD+V +L+  GA +  K+  G TPL  A    +  + K +E+ G
Sbjct: 69  DNRTALHVAACEGFTDVVDLLLQKGAEVDPKDRWGSTPLADAIFYKKNDVIKLLEKHG 126


>Glyma15g09490.1 
          Length = 456

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 174 FNLGHVTNVASARPQTDYEVS--GEGLREAIK------NGDIAAVKKLLNEGVDANYRDK 225
           F LG  +++A  R   + E+   GE + + ++       GD+  +++ L  GV  NY+D 
Sbjct: 9   FTLGKQSSLAPERHNKEAELQKDGEAVDQGVRLMYSAFEGDVDGIREALESGVSVNYKDI 68

Query: 226 QGLSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGG 283
              + LH+AA    TD+V +L+  GA +  K+  G TPL  A    +  + K +E+ G
Sbjct: 69  DNRTALHVAACEGFTDVVDLLLQKGAEVDPKDRWGSTPLADAIFYKKNDVIKLLEKHG 126


>Glyma02g45770.1 
          Length = 454

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)

Query: 174 FNLGHVTNVASARPQTDYEVSGEGLREAIK------NGDIAAVKKLLNEGVDANYRDKQG 227
           F+LG  +++A  R     + S E L  A++       GD   +K+LL+ G D N+ D  G
Sbjct: 10  FSLGRQSSLAPERGGCGGDAS-EALDPAVRLMYLANEGDSDGIKELLDAGSDVNFTDIDG 68

Query: 228 LSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGG 283
            + LH+AA   +TD+V +L+  GA +  ++  G TPL  A     + + K +E+ G
Sbjct: 69  RTALHVAACQGRTDVVGLLLRRGADVDPQDRWGSTPLVDAMYYKNHDVVKLLEKHG 124


>Glyma04g02510.1 
          Length = 525

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCFNN 66
           P +  ++C  C   F  F RRHHCR+CG   C++ +  ++AL        VRVC  C   
Sbjct: 379 PDEAVSKCTACGTDFGAFVRRHHCRNCGDIFCDKCTYGRIALTADENAQPVRVCDRCMAE 438

Query: 67  SRSQEVPHA----SSDGVNNITDTISKLDIDGNVDSKTLPSADNNPVSGIKECKCGMPLC 122
             SQ +  A    S   + +  D   KL  +   + KT  S  +     +KE  C  P+C
Sbjct: 439 V-SQRLTSAKESSSKPALQSHEDLARKLQEELERNRKTSGSKSDGSARRMKEVAC--PIC 495


>Glyma04g02510.2 
          Length = 271

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCFNN 66
           P +  ++C  C   F  F RRHHCR+CG   C++ +  ++AL        VRVC  C   
Sbjct: 125 PDEAVSKCTACGTDFGAFVRRHHCRNCGDIFCDKCTYGRIALTADENAQPVRVCDRCMAE 184

Query: 67  SRSQEVPHA----SSDGVNNITDTISKLDIDGNVDSKTLPSADNNPVSGIKECKCGMPLC 122
             SQ +  A    S   + +  D   KL  +   + KT  S  +     +KE  C  P+C
Sbjct: 185 V-SQRLTSAKESSSKPALQSHEDLARKLQEELERNRKTSGSKSDGSARRMKEVAC--PIC 241


>Glyma14g03040.1 
          Length = 453

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 174 FNLGHVTNVASARPQTDYEVSGEGLREAIK------NGDIAAVKKLLNEGVDANYRDKQG 227
           F+LG  +++A  R       S E L  A++       GD   +K+LL+ G + N+ D  G
Sbjct: 10  FSLGRQSSLAPERAGAG--DSSEALDPAVRLMYLANEGDSDGIKELLDAGSNVNFTDIDG 67

Query: 228 LSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGG 283
            + LH+AA   +TD+V +L+  GA +  ++  G TPL  A     +++ K +E+ G
Sbjct: 68  RTSLHVAACQGRTDVVDLLLRRGAHVDPQDRWGSTPLVDAMYYKNHQVVKLLEKHG 123


>Glyma08g15940.1 
          Length = 157

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 185 ARPQTDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVF 244
           ARP+T  E + E L +A +  D+  VK L   GV  + +D+QG + LH+AA     DIV 
Sbjct: 12  ARPETTSE-NIEALLDAARYDDMDDVKSLEASGVPLDSKDEQGRTALHMAAANGHIDIVE 70

Query: 245 ILMDSGASLKYKNAQGETPLDCA 267
            L+  G  L   N +  TPL  A
Sbjct: 71  YLISRGVDLNSPNEEKNTPLHWA 93


>Glyma13g29520.1 
          Length = 455

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 174 FNLGHVTNVASARP------QTDYEVSGEGLREAIK--NGDIAAVKKLLNEGVDANYRDK 225
           F LG  +++A  R       Q D EV  +G+R       GD+  + + L  GV  NY+D 
Sbjct: 9   FTLGKQSSLAPERHNKEAELQNDGEVVDQGVRLMYSAFEGDVDGICEALEFGVSVNYKDI 68

Query: 226 QGLSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKMEEGG 283
              + LH+A     TD+V +L+  GA +  K+  G TPL  A    +  + K +E+ G
Sbjct: 69  DNRTALHVAVCEGFTDVVDLLLQKGAEVDPKDRWGSTPLADAIFYKKNDVIKLLEKHG 126


>Glyma06g02550.1 
          Length = 548

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCFN- 65
           P +  ++C  C   F  F RRHHCR+CG   C++ +  ++AL        VRVC  C   
Sbjct: 402 PDEAVSKCTACGTDFGAFVRRHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAE 461

Query: 66  -NSRSQEVPHASSD-GVNNITDTISKLDIDGNVDSKTLPSADNNPVSGIKECKCGMPLC 122
              R      +SS   + +  D   KL  +   + K   S  +     +KE  C  P+C
Sbjct: 462 VTQRLTSAKESSSKPALQSHEDLAKKLQEELERNQKASGSKSDGSARRMKEVAC--PIC 518


>Glyma07g05100.1 
          Length = 1792

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALP------QFGLYSNVRVC 60
           P Q    C  C   F  F R+HHCR CGR  CN+ +++ +  P       +     +RVC
Sbjct: 35  PDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVC 94

Query: 61  ADCFNNSRSQEVPHASSDGVNNI 83
             C+       V   +S  V+N+
Sbjct: 95  NYCYKQWEQGIVAFDNSIPVSNL 117


>Glyma17g37890.1 
          Length = 339

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 29/58 (50%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCF 64
           P +   +C  C   F  F RRHHCR+CG   C++ +  ++AL        VRVC  C 
Sbjct: 193 PDEAVLKCTACGVDFGAFLRRHHCRNCGDIFCDKCTRGRIALTSDEDALQVRVCDRCM 250