Miyakogusa Predicted Gene

Lj4g3v2215340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215340.1 Non Chatacterized Hit- tr|I1LYB2|I1LYB2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,93.57,0,Rad51,DNA
recombination and repair protein Rad51, C-terminal; no
description,NULL; seg,NULL; ATPases,CUFF.50515.1
         (342 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g17530.1                                                       644   0.0  
Glyma17g04980.1                                                       639   0.0  
Glyma10g38830.1                                                       338   6e-93
Glyma18g52510.1                                                       110   2e-24
Glyma03g03210.1                                                        98   1e-20
Glyma15g04920.1                                                        92   7e-19
Glyma11g15300.1                                                        72   7e-13
Glyma20g28940.1                                                        53   5e-07
Glyma15g27640.1                                                        50   5e-06

>Glyma13g17530.1 
          Length = 344

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/342 (92%), Positives = 323/342 (94%), Gaps = 2/342 (0%)

Query: 1   MEQQRHQKTAXXXXXXXXXXXXHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPR 60
           MEQQRHQK               GPLP+EQLQASGIA+ DVKKLKDAGICTVESVAYTPR
Sbjct: 5   MEQQRHQKAPQQQDEAEEIQP--GPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPR 62

Query: 61  KDLLQIKGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGI 120
           KDLLQIKGISEAKVDKI+EAASKLVPMGFTSASELH QR++IIQITTGSRELDKIL+GG+
Sbjct: 63  KDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQRDAIIQITTGSRELDKILEGGV 122

Query: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
           ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
Sbjct: 123 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 182

Query: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE 240
           FGLNG DVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE
Sbjct: 183 FGLNGVDVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE 242

Query: 241 LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATT 300
           LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQ+KPIGGNIMAHATT
Sbjct: 243 LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATT 302

Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
           TRLALRKGRGEERICKVISSPCLAEAEARFQI AEGVSDVKD
Sbjct: 303 TRLALRKGRGEERICKVISSPCLAEAEARFQICAEGVSDVKD 344


>Glyma17g04980.1 
          Length = 343

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/320 (96%), Positives = 316/320 (98%)

Query: 23  HGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAAS 82
           HGPLP+EQLQASGIA+ DVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKI+EAAS
Sbjct: 24  HGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIIEAAS 83

Query: 83  KLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHT 142
           KLVPMGFTSASELH QR++IIQITTGS ELDKIL+GG+ETGSITELYGEFRSGKTQLCHT
Sbjct: 84  KLVPMGFTSASELHAQRDAIIQITTGSTELDKILEGGVETGSITELYGEFRSGKTQLCHT 143

Query: 143 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDH 202
           LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDH
Sbjct: 144 LCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDH 203

Query: 203 QSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 262
           QSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF
Sbjct: 204 QSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEF 263

Query: 263 GVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVISSPC 322
           GVAIVITNQVVSQVDGSAVFAGPQ+KPIGGNIMAHATTTRLALRKGRGEERICKVISSPC
Sbjct: 264 GVAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATTTRLALRKGRGEERICKVISSPC 323

Query: 323 LAEAEARFQILAEGVSDVKD 342
           LAEAEARFQI AEGVSDVKD
Sbjct: 324 LAEAEARFQICAEGVSDVKD 343


>Glyma10g38830.1 
          Length = 335

 Score =  338 bits (867), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 169/301 (56%), Positives = 218/301 (72%), Gaps = 1/301 (0%)

Query: 28  IEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPM 87
           I++L A GI + DVKKL+DAGI T   +    +K+L  IKG+SEAKVDKI EAA KLV  
Sbjct: 32  IDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNF 91

Query: 88  GFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTC 147
           G+ + S+  ++R+S+I+ITTGS+ LD++L GG+ET +ITE +GEFRSGKTQL HTLCV+ 
Sbjct: 92  GYITGSDALLKRKSVIRITTGSQALDELLGGGVETSAITEAFGEFRSGKTQLAHTLCVST 151

Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLL 207
           QLP +  GG GK  YID EGTFRP R++ IA+RFG++   VL+N+ YARAY  +HQ  LL
Sbjct: 152 QLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLL 211

Query: 208 LEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIV 267
           L  A+ M E  F ++IVDS  AL+R DFSGRGEL+ RQ  LA+ L  L K+A+EF VA+ 
Sbjct: 212 LGLAAKMSEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIKIAEEFNVAVY 271

Query: 268 ITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVISSPCLAEAE 327
           +TNQV+S   G  VF     KP GG+++AHA T RL  RKG+GE+RICKV  +P L EAE
Sbjct: 272 MTNQVISD-PGGGVFVTDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPEAE 330

Query: 328 A 328
           A
Sbjct: 331 A 331


>Glyma18g52510.1 
          Length = 288

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 31/266 (11%)

Query: 104 QITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
           + T G   LD+ L GG+   S+TE  GE   GKTQLC  L ++ QLP   GG    +++I
Sbjct: 15  KCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLPPSHGGLSASSIFI 74

Query: 164 DAEGTFRPQRLLQIADRF-----GLNGADVLENVAYARAYNTDHQ--------SRLLLEA 210
             E  F  +RL  ++  F      L  +D  + V + RA ++ H+           LL +
Sbjct: 75  HTEFPFPFRRLRHLSRAFRASHPDLPCSDPCDRV-FLRAVHSAHELLNLIPTIETFLLHS 133

Query: 211 ASMMVETRFAVMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADEFGVAIVIT 269
            S     R  ++++DS  AL+R+DF   G +L  R          L++LA  FG+A+V+T
Sbjct: 134 KSPWRPVR--IIVIDSIAALFRSDFENTGSDLRRRSSLFFGISGGLRQLAKRFGIAVVVT 191

Query: 270 NQVVSQV-DGSAVF---------AGPQVKPIGGNIMAHATTTRLALRKGRGEE----RIC 315
           NQVV  + DG   F         +G +V P  G   AH   +RL L K   E     R  
Sbjct: 192 NQVVDLIGDGDVSFGSLGNGLYSSGRRVCPALGLAWAHCVNSRLFLSKDEDEPPVKTRKM 251

Query: 316 KVISSPCLAEAEARFQILAEGVSDVK 341
           +V+ +P L  +   + I  EGV  V+
Sbjct: 252 RVVFAPHLPHSSCEYVIKGEGVFGVE 277


>Glyma03g03210.1 
          Length = 368

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 17/242 (7%)

Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
           ITT   +LD IL GGI+   +TE+ G    GKTQ+   L V  Q+P + GG  GKA+YI 
Sbjct: 126 ITTSCADLDNILGGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIA 185

Query: 165 -----AEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR- 218
                AE +    +  Q  D   ++  ++LEN+ Y R  +   Q  L+      + E + 
Sbjct: 186 CKEDMAEYSRHFHKDFQACD-VKMHPNNILENIFYFRVCSYTEQIALINYLDKFITENKD 244

Query: 219 FAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQ-VD 277
             ++IVDS T  +R DF    +++ R   L++    L KLA +F +A+V+ NQV ++ ++
Sbjct: 245 VKILIVDSVTFHFRQDFD---DMALRTRLLSEMALKLMKLAKKFRLAVVMFNQVTTKHIE 301

Query: 278 GSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVISSPCLAEAEARFQILAEGV 337
           GS      Q+    G+  +H+ T R+ L    G ER   +  SP L  A A + +   G+
Sbjct: 302 GSF-----QLTLALGDSWSHSCTNRIILF-WNGNERHAFIDKSPSLKSASAPYSVTTRGI 355

Query: 338 SD 339
            +
Sbjct: 356 RN 357


>Glyma15g04920.1 
          Length = 349

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 50/274 (18%)

Query: 104 QITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
            ++T  + LD+ L GGI  G +TEL G    GKTQ C  L +   LP + GG +G+ +YI
Sbjct: 74  HLSTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYI 133

Query: 164 DAEGTFRPQRLLQIADRFGLNGAD-----------------VLENVAYARAYNTDHQSRL 206
           D E  FR +RL++I    G+N                    +L   + +    + HQ R+
Sbjct: 134 DVESKFRSKRLIEI----GINSFPEIFLKKGMAQEMAGRILILHPTSLSEFAESLHQIRV 189

Query: 207 LLEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAI 266
            L      ++ +  ++I+DS  AL   +       ++RQ  L   +  ++ LA+   + +
Sbjct: 190 SL------LQQQVKLLIIDSMAALVLGEHDSE---ASRQQALGWHVSFIKSLAEFSRIPV 240

Query: 267 VITNQVVSQV------------------DGSAVFAGPQVKPIGGNIMAHATTTRLALRKG 308
           V+TNQV SQ+                  D  A +    V  +G N  AHA T RL L + 
Sbjct: 241 VLTNQVRSQIGDESRMYSFQAQSHSIIKDNPATYDSHLVAALGIN-WAHAVTIRLVL-EA 298

Query: 309 RGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
           R  +R  K+  SP  A     F+I + G+  + D
Sbjct: 299 RSGQRFIKLAKSPISAPLAFPFKITSSGLVLLDD 332


>Glyma11g15300.1 
          Length = 321

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 34/242 (14%)

Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
           ++TG   +D +L GG+  G +TEL G   SGKTQ C     T          +   +Y+D
Sbjct: 89  LSTGCEGIDALLRGGLREGQLTELVGSSSSGKTQACLLSASTV-----VAKHKSSVIYLD 143

Query: 165 AEGTFRPQRLLQIADR-----FGLNGAD-----VLEN-VAYA-----RAYNTDHQSRLLL 208
              +F PQR+     +     FG N AD     VL+  + Y+     + ++  HQ ++ L
Sbjct: 144 TGNSFSPQRIAHFVGQSSGHIFG-NQADHMLKKVLDRIICYSVFDVYQMFDVLHQLKINL 202

Query: 209 EAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVI 268
            +  +       ++IVDS ++L      G G      M  A FL  L+KLA E  +A+++
Sbjct: 203 RSEIVKSNQHVRLLIVDSISSLITPILGGSGPQGHALMISAGFL--LKKLAHEHNIAVLV 260

Query: 269 TNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICK--VISSPCLAEA 326
           TN VV   DG +       KP  G         R+ L +  G   +C   ++  P +A  
Sbjct: 261 TNHVVGGDDGIS-------KPAMGESWKSVPHVRILLSRDCGSN-VCNISILKHPSMASG 312

Query: 327 EA 328
            A
Sbjct: 313 RA 314


>Glyma20g28940.1 
          Length = 79

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 35/52 (67%)

Query: 43 KLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPMGFTSASE 94
          KL+DAGI T   +    +K+L  IKG+SE KVDKI EAA K+V  G+ + S+
Sbjct: 2  KLQDAGIYTCNGLMMHTKKNLTGIKGLSEVKVDKICEAAEKIVNFGYITGSD 53


>Glyma15g27640.1 
          Length = 414

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 36/221 (16%)

Query: 107 TGSRELDKILDGGIETGSITELYGEFRSGKTQLC-HTLCVTCQLPLDQGGGEGKAMYIDA 165
           +G   LD  L GG+  G I E+YG   SGKT L  H +    +L        G AM +DA
Sbjct: 100 SGCLTLDCALGGGLPKGRIIEIYGPESSGKTTLALHAIAEVQKL-------GGNAMLVDA 152

Query: 166 EGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVD 225
           E  F P     +       G DV EN+   +    DH    L  A  M       ++ VD
Sbjct: 153 EHAFDPAYSKAL-------GVDV-ENLIVCQ---PDHGEMALEIADRMCRSGAIDLICVD 201

Query: 226 SATALY-RTDFSGRGELSARQMHL-----AKFLRSLQKLADEFGVAIVITNQVVSQVDGS 279
           S +AL  R +    GE+  +Q+ L     ++ LR +   A + G  ++  NQ+  ++   
Sbjct: 202 SVSALTPRAEI--EGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKI--G 257

Query: 280 AVFAGPQVKPIGGNIMAHATTTRLALR------KGRGEERI 314
             +  P+V   GG  +    + RL +R        +G+E I
Sbjct: 258 VYYGNPEVTS-GGIALKFFASLRLEVRPTGKIKSAKGDEEI 297